Acidithiobacillus ferrooxidans ATCC 53993: Lferr_2013
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Entry
Lferr_2013 CDS
T00758
Name
(GenBank) UbiD family decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe00130
Ubiquinone and other terpenoid-quinone biosynthesis
afe01100
Metabolic pathways
afe01110
Biosynthesis of secondary metabolites
afe01240
Biosynthesis of cofactors
Module
afe_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
Lferr_2013
Enzymes [BR:
afe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
Lferr_2013
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ACH84230
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All DBs
Position
complement(2015946..2017418)
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AA seq
490 aa
AA seq
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MSYRDLRAFLAVLEKRDLLRRLSVPVSPKLEMTEICDRTLRAAGPAILFTQPIGYDMPVL
GNLFGTTERVALGMGGESLADLRQIGQLLAYLKEPDPPRGLRDLWDKLPTLRKILYMAPT
TLSRPPCQEIILRGDEVDLAALPVQTCWPEDAAPLMTWGLTVTKGPHKRRANMGIYRQQV
IGRNRVIMRWLAHRGGAQDLREFQKAQPGEPFPVAVAYGADPATILAAVIPIPDTISEHQ
FAGLLRGGRTELANALSVPLQVPARAEIVLEGHIYPDDMAVEGPFGDHTGYYNEAERFPV
FTVETISHRENPVYHSTYTGRPPDEPAILGAALNEVFVPLLQKQFPEIVDFYLPPEGCSY
RLAVVSIRKGYPGHAKRVMFGIWGFLRQFMYTKFIIVVDEDIDVRRWEDVIWAMTTRMDP
VRDITPVENTPIDYLDFASPVAGLGGKVGMDATNKLPGETAREWGRPIQMTAVVRQRVDD
LLLALDRPLF
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccgtgaccttcgcgcctttttggccgttctcgaaaagcgcgatctattgcgc
cggctgagcgtgcccgtctctcccaaactggagatgacggaaatctgtgaccgaaccttg
cgggcggcagggccggccattctgtttacccagcccatcggctacgacatgccggtgctc
ggcaacctgttcgggacgacggaacgcgtggcgctggggatggggggcgaatccctggca
gatctccggcagatcggtcagttactggcctatctcaaggaacctgacccgccccgcggg
ctgcgcgacctctgggacaaattgcccaccctgcgcaagatcctgtacatggcaccgacc
accctgagtcgccctccctgccaggaaatcatcctgcgcggagatgaggtcgaccttgcc
gccctgccggtgcagacctgctggccagaagacgctgcgccgctcatgacctggggcctg
accgtgaccaaggggccacacaagcggcgggccaacatgggtatctaccggcaacaggtc
atcggtcgtaaccgggtgatcatgcgctggttggcgcaccgggggggggcccaggacctg
cgtgaattccagaaagcgcagccgggcgagccattccccgttgccgtggcctacggcgcc
gatccggcaaccattctggcggcggtcattcctatccccgataccatttccgagcaccaa
ttcgccggcctgctgcgtggcgggcgtactgagctcgccaatgccctgagcgttccgcta
caggtgcccgcgcgcgccgaaatcgtcctggaagggcatatttacccggatgacatggcg
gtggaaggtccttttggagaccacaccggctactacaatgaggccgagcgttttccggta
ttcaccgtggaaaccatcagccaccgcgaaaatcctgtttaccacagcacctacaccggc
cggccccccgatgaaccggccatactgggtgcggccctcaacgaagtcttcgtgcccctg
ctgcagaaacaattcccggaaatcgtggatttttatctgccgccggagggctgttcctac
cgtctggccgttgtcagtatccgcaagggttaccccggtcatgcaaaaagagtcatgttc
ggtatctggggctttttgcgacagttcatgtacaccaagtttatcatcgtggtggacgaa
gacatcgatgtgcgccgttgggaagatgtgatctgggcgatgaccacccggatggacccg
gtgcgcgacattacccccgtcgaaaatacacccatcgattatctcgactttgcttcgccg
gttgccggacttggtggtaaagtgggtatggacgccaccaataaactgcccggagagact
gcccgggaatggggccgccccatccagatgaccgccgtggtgcgccaacgagtggatgac
ctgttgctggcgctggatcggccgctgttctaa
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