Alteriqipengyuania flavescens: QQW98_07885
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Entry
QQW98_07885 CDS
T09518
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aflv
Alteriqipengyuania flavescens
Brite
KEGG Orthology (KO) [BR:
aflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aflv03009
]
QQW98_07885 (rimO)
Enzymes [BR:
aflv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QQW98_07885 (rimO)
Ribosome biogenesis [BR:
aflv03009
]
Prokaryotic type
ribosomal protein modification factors
QQW98_07885 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WJY17581
LinkDB
All DBs
Position
complement(1524704..1526122)
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AA seq
472 aa
AA seq
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MATTPTSIRQAPRVGMVSLGCPKALVDSERILTRLRADGYAMSADYAGADVVLVNTCGFL
DSAKEESLAAIGEAIAENGRVIVTGCMGEEADAIRAAHPQVLAVTGAHQYEQVVEAVHTH
APPSQGPFVDLIPQPDALKQRSGSADQMVKLTPRHYSYLKISEGCNHSCAFCIIPDLRGK
LASRRIDAVLREAEKLVAAGTRELLVISQDTSAYGVDTRHAPRTWKGREVRAHMTDLARE
LGQLDTGDGTPPWVRLHYVYPYPHVDQVIPLMAEGLLTPYLDIPFQHAAPSVLKRMKRPA
NEAKVLARLADWRAICPDIAVRSSFVVGFPGETEDDFAYLLDWLEEAQLDRVGAFQFEPV
EGAQANALPDQVPEAVKEERYARLMAVTERISAAKLAAKVGRTLPVIIDEVGEADEDGDI
GATGRSQADAPEIDGAVYLRNVPASLAPGDIVQVQVEDADAHDLYGVIADPV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacaccaacttccatcaggcaagccccccgcgtcggcatggtcagcctcggc
tgccccaaggcgctggtcgattccgagcgcatcctcacccgcctgcgtgccgatggctat
gccatgagcgccgactatgccggggccgacgtggtgctcgtcaacacctgcggcttcctc
gactccgccaaggaggagagccttgccgccatcggcgaggcgatcgcggagaacggtcgc
gtaatcgtgaccggctgcatgggcgaggaggccgacgccatccgcgccgcccatccgcag
gtcctcgccgtaactggcgcccaccagtacgaacaggtggtggaggcggtgcacacccat
gcgccgccatcgcagggccccttcgtcgacctgatcccgcaacccgatgcgctcaagcag
cgaagcggtagcgcggaccagatggtcaagctcaccccgcgccactactcctacctcaag
atcagcgaggggtgtaaccactcctgcgcgttctgcatcatccccgacctgcgcgggaag
ctggccagccgccgcatcgacgcggtcctgcgcgaggcggagaagctggtcgccgccggc
acgcgcgagctgcttgtcatcagccaggacacctccgcctacggtgtcgatacgcggcac
gccccccggacctggaagggccgcgaagtccgcgcccacatgaccgacctcgcccgcgag
ctcggccagctcgataccggagacggcaccccgccgtgggtgcgcctccactacgtctac
ccctacccgcacgtcgaccaggtcatcccgctgatggccgaagggctgctgacgccctat
ctcgacatcccgttccagcacgccgcgccctccgtcctcaagcgcatgaagcgccccgcg
aacgaggcgaaggtgctggcgcggctggccgactggcgcgcgatctgccccgacatcgcc
gtgcggtcgagcttcgtggtcggcttcccgggcgagacggaggacgacttcgcctacctg
ctcgactggctggaggaagcgcagctcgaccgcgtcggcgccttccagttcgaaccggtc
gagggcgcgcaggccaacgccctgcccgaccaggtgcccgaggcggtgaaggaggaacgc
tatgcccggctgatggcggtgacggagcggatcagcgccgccaagctcgctgccaaggtc
ggccgcacgctgcccgtcatcatcgacgaggtgggggaggccgacgaggacggcgacatc
ggggccaccggccgcagccaggccgacgcgcccgagatcgacggcgccgtctacctgcgc
aacgtgcccgccagcctggcgccgggcgacatcgtgcaggtgcaggtcgaagacgccgac
gcgcacgacctctacggggtgattgctgaccctgtttga
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