Acidaminococcus fermentans: Acfer_1017
Help
Entry
Acfer_1017 CDS
T01151
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
afn
Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afn03009
]
Acfer_1017
Enzymes [BR:
afn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Acfer_1017
Ribosome biogenesis [BR:
afn03009
]
Prokaryotic type
ribosomal protein modification factors
Acfer_1017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
AsnC_trans_reg2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
ADB47387
UniProt:
D2RJY5
LinkDB
All DBs
Position
complement(1146722..1148050)
Genome browser
AA seq
442 aa
AA seq
DB search
MEIGVVSLGCPKNLVDSEVMMGLIRERQWTITNDPTHADVIIVNTCGFIESAKTESINTI
LQMAEYKKDDPHRKLIVTGCLGQRYADELFADLPEVDAIIGTECYDQIGTVIDRVEKGER
FTLLKPPQKYTQKARRVLTTPQYTAYLKIAEGCNNRCSYCAIPKIRGPYRSRPYEEVLQE
ARDLVSQGVRELILVAQDTTQYGIDLYHKLRLADLLRDLNTIPDLKWIRILYCYPDSFTD
ELIETMAQCDKVCHYVDLPLQHASNSLLHTMHRRDTREQVEELLAKLRKRMPDICLRTTF
IVGFPGETDGQFQELLDFVRKERFQCAGVFPYSQEDGTEAGAMPNQIPDEVKQDRYHALM
SLQAEISEEIQQEREGKVLEVLIEGKDEEDPNLALGRSYAEAPDIDGKIYVEEAADLKAG
DFVKVRISQGFTYEAVGQIVKE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ttggaaatcggagtagtcagccttgggtgtcccaagaacctggtggattcggaagtgatg
atgggccttatcagagagcgccagtggaccattaccaatgaccccacccatgcggatgtg
atcatcgtcaacacctgcggcttcatcgaaagtgccaaaacagagtccatcaacaccatc
ctccagatggcggaatacaaaaaggatgacccgcaccggaagctgatcgtcaccggctgt
ctgggccagcggtacgcggatgaactgtttgcggacctgccggaagtggatgccatcatc
ggcaccgaatgctatgaccagatcgggacggtcatcgaccgggtggaaaagggggaacgg
ttcaccctgctgaaacccccgcaaaaatatacccagaaggccagacgggtgctgaccacc
ccccagtacacggcttatctgaagattgccgaaggatgcaacaaccggtgttcctactgt
gccatccccaagatccgggggccctaccggagccgtccctatgaggaagtcctccaggaa
gcccgtgatctggtgagccagggcgtgcgggaactgatcctggtggcccaggacaccacc
cagtacggcatcgatctgtaccacaagctgcggctggcggatctgctccgggatctgaac
accattcccgacctgaaatggatccggatcctgtactgctatccggattccttcaccgac
gaactgatcgagaccatggcccagtgcgacaaggtgtgccattatgtggatctgcccctc
cagcacgccagcaacagcctgctccacaccatgcaccggcgggatacacgggaacaggtg
gaggaactgctggccaaactgcggaaacggatgccggatatctgcctgcggaccaccttc
atcgtgggcttcccgggagaaaccgacggacagttccaggagctgctggattttgtccgg
aaggaacggttccagtgcgccggggtgttcccctacagccaggaagacggcaccgaagcc
ggggccatgcccaaccagatcccggacgaagtgaaacaggaccggtaccatgccctgatg
agcctccaggcggagatttccgaagaaatccagcaggaacgggaaggaaaggtgctggaa
gtgctcatcgaaggcaaggatgaggaagatcccaacctggccctgggccgcagctatgcg
gaagccccggacatcgacgggaagatttatgtggaagaagcggcggatctgaaggccgga
gactttgtgaaggtccggatcagccagggctttacctatgaagcggtggggcagatcgta
aaggagtga
DBGET
integrated database retrieval system
