Acidimicrobium ferrooxidans: Afer_1640
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Entry
Afer_1640 CDS
T00956
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
afo
Acidimicrobium ferrooxidans
Pathway
afo00250
Alanine, aspartate and glutamate metabolism
afo00410
beta-Alanine metabolism
afo00430
Taurine and hypotaurine metabolism
afo00650
Butanoate metabolism
afo01100
Metabolic pathways
afo01110
Biosynthesis of secondary metabolites
afo01120
Microbial metabolism in diverse environments
afo02024
Quorum sensing
Module
afo_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
afo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Afer_1640
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Afer_1640
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Afer_1640
00430 Taurine and hypotaurine metabolism
Afer_1640
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Afer_1640
Enzymes [BR:
afo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
Afer_1640
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Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
ACU54556
UniProt:
C7M0P8
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Position
complement(1731735..1733147)
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AA seq
470 aa
AA seq
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MIRLARRHSSPRRHTFSKDLPINPLFVRELTEGVPRARLRSDGLGPDLAYQVIHDEIAMD
GNARLNLATFVTTWMEPQADRLYAEAVDKNMIDKDEYPQTAAIEGRCVRMLADLWHAPDP
DTTIGVSTTGSSEACMLAGLALKRRWQIARRATGAPTDRPNIVVSSAVQVVWEKFANYFE
VEPRYVPVTPEHPTLDADGVLAAVDERTIGVVPILGVTYTGVYEPVAEIARALDELYERT
GLDIPIHVDGASGGFVAPFLEPQLDWDFRLPRVVSINASGHKFGLVYPGLGWVVWRQATD
VPEELIFRVAYLGGDMPTLALNFSRPGAQVLLQYYTFLRLGREGFTAVHASAQRVARMIA
DELASLGPFEVIGDGRDIPVVAWRLRPGEVRPWDLNHLSHELRAYGWQVPAYPMPDAMSD
VTVMRAVVRSEFSADMATLFLDDLAECVEVLERHGTPPPVHPTVRESFHH
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggttggctcgacggcactcgtcaccacggcgacacacgttctcgaaggacctc
ccgatcaatccgctcttcgtccgcgagctcaccgagggtgtaccacgtgcacggctgcgg
agcgatggtctcggtcccgacctcgcttaccaggtgattcacgacgagatcgcgatggat
ggcaacgcgcgcctcaaccttgcgaccttcgtgaccacgtggatggagccgcaagccgat
cgtctctatgccgaggcggtcgacaagaacatgatcgacaaggacgagtacccgcagacg
gcagcgatcgagggtcgctgtgttcggatgctcgccgatctgtggcatgcgcccgatccc
gacaccacgatcggtgtctccaccacgggttcgtcagaggcgtgcatgctcgcaggcctc
gcgctcaagcggcgttggcagatcgcccgtcgcgccacgggggcgccgacggatcggccg
aacatcgtcgtgagctccgccgtgcaggtggtgtgggagaagttcgctaactacttcgag
gtcgagcctcgttacgttccggtcacgcccgagcacccgacgctggacgccgacggggta
ctcgcggcggtggacgagcgcacgatcggtgtcgtgccgatccttggcgtgacgtacacg
ggggtctacgagccggtcgccgagatcgcgcgtgccctcgacgagctctacgagcgtacg
ggtctcgacatcccgatccacgtcgacggcgcctcgggcgggtttgtcgcgccgttcctc
gagccacagctcgactgggacttccgcctaccgcgagtcgtctcgatcaacgcatcgggc
cacaagttcgggctcgtctatcccggactcggctgggtcgtatggcgccaagcgacggac
gttcccgaagagctgatctttcgtgtcgcctatctcggcggtgacatgccgacgctggcg
ctgaacttctctcgcccgggggcgcaggtgctcctgcagtactacaccttcttgcgactg
ggccgcgagggcttcaccgccgtgcacgcgagtgcccaacgagtcgctcgcatgatcgcc
gacgagctggcatcgctcggaccgttcgaggtgatcggcgacgggcgtgacatccctgtc
gtggcgtggcgtctgcggccaggtgaggtgcgaccgtgggacctcaatcacctctcacac
gagctgcgcgcttatgggtggcaggtgccggcctatcccatgcctgatgcgatgagcgac
gtcacggtgatgcgcgccgtggtgcgcagcgagttctccgcggacatggcaacgctgttc
ctcgatgacctcgccgagtgtgtcgaggtgctcgagcgccacgggaccccgccgccagtg
catccgaccgtgcgggagtccttccaccactga
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