Acidimicrobium ferrooxidans: Afer_2021
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Entry
Afer_2021 CDS
T00956
Name
(GenBank) Extradiol ring-cleavage dioxygenase class III protein subunit B
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
afo
Acidimicrobium ferrooxidans
Pathway
afo00362
Benzoate degradation
afo00627
Aminobenzoate degradation
afo01100
Metabolic pathways
afo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
afo00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Afer_2021
00627 Aminobenzoate degradation
Afer_2021
00624 Polycyclic aromatic hydrocarbon degradation
Afer_2021
Enzymes [BR:
afo01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
Afer_2021
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
ACU54922
UniProt:
C7M2D3
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Position
complement(2137654..2138517)
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AA seq
287 aa
AA seq
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MADVCAIIASTHHPFYYRASTSTGADRPDFADVWVAKIEAFRETLTRAEPDVLVMVGSDH
FHQLWLDNMPQFLVGKAPVFDANYYNEEREFGLPRMRVSGQEELAAYILRQGLDEGFDLA
FSNELRIDHSITCALITLRPQVDLPIVPVYTNIFAPPMPQPKRFVELGAALRRIVEQWPS
NQRVAIIGTGHLSLELGGPRQFGPHGPDPDFDQKAIQWIANADIDGALAEVSLESLWLPG
NATHGFMDFLLMMGVVGQGVRADYVDNLDLFHTMEAYFTWYPRRGEA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgtgtgtgcgatcatcgcgtcgacgcaccacccgttctactacagggcgagc
acgagtaccggagccgatcgccccgacttcgccgacgtctgggtcgccaagatcgaggcg
ttccgagagacgttgacccgcgccgagccggacgtgctcgtgatggtcggctctgaccac
tttcaccaactgtggctcgacaacatgccacagttcctggtcggcaaggcgccggtgttc
gacgcgaactactacaacgaggagcgggagttcggactcccacgtatgcgggtgtccggc
caggaggaactcgccgcgtacatccttcgacagggactcgacgagggctttgatcttgcg
ttctcgaacgagctccgcatcgaccactcgatcacgtgtgcgctcatcacgctgcgaccg
caggtcgacctgcccatcgtgcccgtctacacgaacatcttcgcgccgccgatgccccag
cccaaacggttcgtcgagctgggagcggcgctccggcgcatcgtcgagcagtggccgagc
aaccagcgcgtcgccatcatcggaactggacatctctcgctggagttgggcggaccgcgt
cagttcggtccgcacgggccggacccagatttcgatcagaaggcgatccagtggatcgcg
aacgctgacatcgatggggctctggcagaggtcagtctcgagagtctctggctgccgggc
aacgccacgcacggattcatggacttcctgctcatgatgggcgtcgtcggtcagggtgtg
cgagccgattacgtcgacaacctcgacctgttccacacgatggaggcatatttcacctgg
tatccgaggaggggggaggcgtga
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