Aptenodytes forsteri (emperor penguin): 103895330
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Entry
103895330 CDS
T08527
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afor04040
]
103895330 (SCN1A)
Ion channels [BR:
afor04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103895330 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
SieB
Lustrin_cystein
Chlamy_scaf
FUT8_N_cat
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
103895330
NCBI-ProteinID:
XP_019326493
LinkDB
All DBs
Position
Unknown
AA seq
2014 aa
AA seq
DB search
MEQSVLVPPGPDSFQYFTRESLAAIEQRIAAEKTKNSKQDRKDNDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDMDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENFTLETNITSQLNSTI
GENGTLVNSTVTPFDWKGYIEDESHFYFLEGQNDALLCGNSSDAGQCPEGYTCVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEAAQAAAVAAAAVTASAESREPS
AGGEAEGLSESSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRR
KGFRLSIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFA
DDEHSTFEDNDSRRDSLFVPRRQSERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVV
SLVGGPSVPTSPVGQLLPEVIIDKPATDDNGTTTETEMRKRISSSFHVSMDFLEDPALRE
RAMSIASILTNTVEELEESRQKCPPCWYKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVD
LAITICIVLNTLFMAMEHYPMTDEFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEG
WNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYKECVCKIASDCVLPRWHMQDFFHSFLIVFRVLCGE
WIETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAVTDDDNEMNN
LQIAVARMQKGIDYVKRKAREFIQKAFVKKQKALDEIKPLEDLNNKNSCISNHTTVELSK
DHDYIKDANGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEE
FSSESDLEESKEKLNLSSSSEGSTVDIGLPAEEQPEAEPEEAQEPEACFTEGCVRRFKCC
QVSIEEGRGKQWWNLRKTCFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTML
EYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAI
KSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK
FYYCVNTTTDERFEVDQINNFSQCEELIKNNQSARWKNVKVNFDNVGFGYLSLLQVATFK
GWMDIMYAAIDSREVLQQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK
FGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTQQVFDISIMILIC
LNMVTMMVETDDQSKEMENILYWINLVFIVLFTGECVLKLISLRHYYFTLGWNIFDFVVV
ILSIVGMFLAEMIEKYFVSPTLFRVSSDSRIGRILRLIKGAKGIRTLLFALMMSLPALFN
IGLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAP
ILNSGEPDCDPNKAHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVA
TEESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSDFAAALEPPLHLPKPNKVQLIAM
DLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKASYEPITTTLKR
KQEEVSAVIIQRAYRRHLLKRTVKQASFIYNKNKTEGGTGQGMKDEILIDKLNENSFTEK
TDITASTAVCPPSYDRVTRPVKEKREKEDKDVQK
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcagtgcttgtaccaccaggaccagacagcttccaatacttcactagagag
tctcttgcagctattgaacagcgcattgctgcagaaaaaactaagaattctaaacaagat
cgtaaagacaatgatgatgaaaatgggccaaagccaaacagtgatttggaggcaggaaaa
acacttccgtttatatacggcgacatacctccaggaatggtgtctgagcccttggaagac
atggacccatattacatcaataaaaaaacctttatagtattgaataaagggaaggcaatc
ttccggttcagtgccacctctgccctgtacattttaactcccttcaatcctcttagaaaa
atagctattaaaattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccggactggacaaagaatgtagagtat
acattcactggaatttacacgtttgagtcactcataaaaatcattgcaaggggcttttgc
ttagaagattttacttttcttcgagatccatggaactggcttgatttcactgtcattacc
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcttgaagactatcgtgggagcc
ctaattcaatctgtgaagaagctctcggacgttatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagaaaattttactctggaaacaaatattacttcccagctaaacagcaccata
ggtgaaaatggtacattggttaattcaacagtgactccatttgactggaaggggtatatt
gaagatgaaagtcatttttattttctggaagggcaaaacgatgctctgctttgcggaaat
agttctgatgctgggcagtgcccagaaggatatacatgcgtgaaagctggtagaaacccc
aattatggctacacgagttttgacaccttcagctgggctttcttgtcactatttcggttg
atgactcaagacttctgggaaaacctttatcaattgacattgcgtgctgctgggaaaacg
tacatgatattttttgttctggtgatttttctgggttctttctacctgatcaacttgatc
ttggctgtggtcgccatggcctatgaagaacagaatcaagcaaccatggaagaagcagag
cagaaagaggcagaatttcaacagatgctggaacaactgaagaagcaacaagaagcagct
caggcagcagcagtggcagcagcagcagtaacagcatctgcggagtccagggagcccagt
gctgggggagaagcagaagggctctcagaaagttcctcagaggcatcaaaattgagctca
aagagtgcaaaagagaggagaaatagaaggaaaaaaagaaaacagaaagaacagtctgga
ggagaggaaaaagatgaagatgaatttcacaagtctgaatcagaagacagcatcagaagg
aaaggtttccgattatctattgaaggcaatagattgacatatgaaaagaagtattcttct
ccacatcagtctttgctgagcattcgaggctccctattttctccaaggcgcaacagcaga
acaagccttttcagcttcagaggtagagcaaaggatataggatcagaaaatgactttgct
gatgatgagcacagcacttttgaagacaatgatagccgaagagattctctctttgtgccg
cgcagacagagtgaacggcgcaacagtaacattagtcaggccagtaggtcatccaggatg
ctggcagtgtttccagtgaatgggaagatgcacagcactgtggattgcaatggggtggtt
tccctggttggtggaccatctgttcctacatcgcctgttggacagcttctgccagaggtg
ataatagataaaccagctactgatgacaatggtaccactacagaaacagaaatgaggaag
agaatatcaagctctttccacgtttctatggacttcctggaagatccagctttaagggaa
agagccatgagtattgctagcatcctcacaaacactgtggaagaactcgaagaatcaaga
cagaaatgcccaccatgttggtataaatttgcaaatattttcttgatctgggactgcagt
ccacattggttaaaagtaaaacatatcgtcaacttagtggtaatggacccatttgttgac
ctggctattacaatttgcattgttttgaatacactctttatggctatggaacattatccg
atgaccgatgaattcaataacgtactttcagttggaaatctggtcttcactggaatcttc
acagcagaaatgtttctcaagataattgcaatggatccttactattatttccaggaaggc
tggaatatttttgatggttttattgtaacccttagcttggttgagcttggtcttgcagat
gtggaaggactctccgttcttcgatcattcagattgttacgagttttcaaattggcaaaa
tcttggccaacactaaatatgctgataaaaattattggtaactcagtgggagctctgggt
aatctgaccctcgtgctggccatcattgtcttcattttcgctgtggttgggatgcagctg
tttgggaaaaactacaaggaatgtgtctgcaaaattgcaagtgactgtgtacttccacgc
tggcacatgcaagatttttttcactcttttttgatcgtatttcgagtgctgtgtggagaa
tggatagaaacgatgtgggactgcatggaggttgctggccaagccatgtgccttacggtc
ttcatgatggtcatggtgattggaaacctagtggtactgaacctctttttggccttgctc
ttgagctcatttagtgcagacaaccttgccgtgacagatgatgacaatgaaatgaataat
ctccaaattgctgtagcaagaatgcagaagggcatagattatgtgaaaagaaaagcacgc
gaattcatccaaaaagcttttgttaaaaaacaaaaagctttagatgaaatcaaaccactt
gaagatttaaacaacaaaaatagctgtatttctaaccatacaaccgtggaactaagcaag
gaccatgactatattaaagatgcgaatggaacaactagtggcataggcacaggtagcagt
gtggaaaaatacataattgacgaaagtgattacatgtcattcataaacaacccaagcctc
actgtgacagtgcccattgctgtgggtgaatccgactttgaaaatctaaacacagaggaa
tttagtagtgaatcagacctggaagaaagcaaagagaagttaaatttgtctagttcatct
gaaggtagcacagttgatattggacttcctgcagaagagcaaccagaagctgaacctgaa
gaagcccaggagccagaggcctgcttcacagaaggctgtgtacgaaggttcaagtgctgt
caagtaagtatagaagaagggagaggaaagcagtggtggaaccttagaaaaacctgcttc
aagattgtcgaacacaactggtttgagactttcattgtctttatgattctcctcagtagt
ggagctctggcttttgaagacatatatattgaacagcgcaaaactatcaagaccatgctg
gaatatgctgacaaagtcttcacttacatcttcattctggaaatgctgctgaagtgggtg
gcctatggctatcaaacatactttactaatgcctggtgctggctggacttcctgattgtc
gatgtctctttggttagcttaacagcaaatgcattgggttactctgaacttggtgccatt
aagtcccttaggacactaagagctttgagacctctaagagctttgtcacgatttgaaggc
atgagggtggttgtgaatgcccttttaggagcaattccatccatcatgaacgtgcttctc
gtttgtcttatattctggctaattttcagcatcatgggagtaaatctgtttgctgggaag
ttctactactgtgttaacaccacaactgatgaaaggtttgaagtcgaccaaatcaacaat
tttagtcagtgcgaggaactcataaaaaacaatcaaagtgcccgatggaaaaacgtgaaa
gtaaactttgataatgtaggatttgggtatctttctttacttcaagtagctacatttaaa
ggctggatggatattatgtatgcagctattgactcaagagaggtattacagcaacctaag
tatgaagacaacctgtacatgtatttgtattttgtcatctttatcatttttgggtctttt
ttcaccctgaacctgttcattggtgtcattattgataacttcaatcagcaaaaaaagaag
tttggaggtcaagacatatttatgacagaagagcagaagaaatactacaatgcaatgaaa
aagctgggatccaaaaaaccacaaaaacctataccaagaccagggaacaaattccaaggc
atggtttttgattttgtgacgcagcaagtatttgacatcagcatcatgattcttatttgt
cttaacatggttaccatgatggtagaaactgatgaccagagtaaagaaatggaaaatatt
ttatactggataaacctggtgttcattgtccttttcactggagaatgtgtcctgaaatta
atttcacttcgccattactatttcactctaggctggaacatttttgattttgtagttgtc
attctctcaatagtaggtatgtttttagctgagatgattgaaaagtattttgtgtccccc
acactattcagagtctcatccgactccagaatcggtcgaatcctgcgtctcattaaaggc
gctaaaggaatccgcactctgctttttgctttgatgatgtctcttcctgctttgttcaac
attggtctgctgctgttcctggtcatgtttatctatgcgatatttggcatgtccaacttt
gcctatgttaagagggaagctgggattgatgacatgttcaactttgaaacgtttggcaac
agcatgatctgcctatttcaaattaccacatctgctggctgggatggtttgctagcccca
attcttaacagtggggagccagactgtgaccccaacaaagctcatccggggagctccgtg
aaaggcgactgcggcaacccttccgttgggattttcttctttgtcagctacattatcata
tcatttctggtagtggtgaacatgtacattgctgtgattttggagaacttcagtgttgcc
actgaagaaagtgctgagcccttgagtgaggatgactttgagatgttctatgaagtctgg
gagaagtttgatcccgatgcaacacaattcatggaatttgagaaattgtctgattttgca
gcagcacttgagcctcctcttcatctacccaaaccaaacaaagtccagcttattgcaatg
gatctgcccatggtaagcggggacagaattcactgccttgacatcttgtttgctttcaca
aagcgtgttttgggggaaagtggggagatggacgccctcagaatacagatggaagatcgg
tttatggcatctaatccttcaaaagcttcctacgaaccaattacaaccacgttaaaacga
aaacaggaggaggtatctgctgtcattattcaacgggcttatagacgtcaccttttaaaa
cgaacagtaaaacaagcttcctttatctacaacaaaaacaaaaccgaaggagggactggt
cagggtatgaaagatgaaatccttattgacaagttaaatgaaaactcatttacagagaaa
accgatataactgcatcaacagcagtttgtccaccttcttatgaccgtgtaacaaggcca
gtcaaagaaaagcgtgaaaaggaagataaggatgttcagaaataa
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integrated database retrieval system
