Acidithiobacillus ferriphilus: K1Y48_04645
Help
Entry
K1Y48_04645 CDS
T07843
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
afp
Acidithiobacillus ferriphilus
Brite
KEGG Orthology (KO) [BR:
afp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afp03009
]
K1Y48_04645 (rimO)
Enzymes [BR:
afp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K1Y48_04645 (rimO)
Ribosome biogenesis [BR:
afp03009
]
Prokaryotic type
ribosomal protein modification factors
K1Y48_04645 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
DUF5666
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UEP59935
LinkDB
All DBs
Position
complement(933348..934688)
Genome browser
AA seq
446 aa
AA seq
DB search
MKAGANTPSKVGFVSLGCPKATVDSERILTQLRAEGYLLVGDYASADVVVVNTCGFIDAA
VAESLEAIGEALEENGKVVVTGCLGAREGGDFVRGAHPKVLAVTGPNQASAVLDAIHEAL
PPAHDPFTDLVPPQGLRLTPPHYAYLKISEGCNQSCSFCIIPSMRGKLVSREPDDILREA
EALVTGGVKELLVISQDTGAYGVDRKYRTAFHDGRPLKTRITDLCAALGDLGVWVRLHYV
YPYPHIDELLPLMAAGKILPYLDVPLQHGSPRILKAMRRPAAAEKTLDRILGWRWIVPDL
TIRSTFIVGFPGETDADFAELLDFLRAAELDRVGCFAYSPVEGAPANAIAGAVPEPVKEE
RRAEFMAVQEAISRGRLQRRVGQRQRVLVDAVGRGGKVIARSASDAPEIDGVVHLGRAAG
LQVGDWVEVEITRADAHDLYGVLVSD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggcgggcgcgaatacgccgtctaaagtcggtttcgtcagcctcggctgccccaag
gccacggtggacagcgaacgcatcctcacccagctgcgcgccgagggctatctgctggtg
ggggattacgccagcgccgacgtggtggtcgtcaacacctgcggctttatcgacgcggcg
gtggcggaatcgctggaggccatcggcgaggcgctggaggagaacggcaaggtggtggtc
accggttgcctgggtgcccgcgagggcggcgactttgtgcgcggcgcccatcccaaggtg
ctcgctgtcaccggccccaaccaggccagtgcggtgcttgacgcgattcatgaggcgctc
cctccggcccacgatcccttcaccgatctggtcccgccccagggcctgcgcctgacgccg
ccccactacgcctacctcaaaatctccgagggctgcaatcagtcgtgcagcttttgcatc
atccccagcatgcgcggcaagctggtcagccgcgagccggacgatattctgcgcgaggcc
gaggcgctggtgaccggtggtgtcaaagaattgctggtgatttcccaggacaccggcgct
tacggggtggaccgcaaataccgcaccgcctttcacgacggccgcccgctcaagacccgc
atcaccgacctctgcgcggccctgggcgatctcggcgtctgggtgcgcctgcactacgtc
tacccctacccgcacatcgacgaactcctgcccctgatggcggcgggcaagattctgccc
tacctggatgtgcccctgcagcacggtagtccgcgtatcctcaaggccatgcgccgcccc
gccgccgccgaaaaaaccctcgaccggattctcggctggcgctggatcgtgcctgatctg
accatccgcagcaccttcatcgtcggcttccccggcgaaaccgatgcggactttgcggag
ttgctggattttctgcgggcggcggaactggaccgggtgggctgcttcgcctattcgcca
gtagaaggtgcgcccgccaacgcgatcgccggagcggtgccggagccggtcaaagaagag
cgacgcgccgaattcatggccgtgcaggaagccatcagccgtgggcggctacaacgccgg
gtgggccagcgtcagcgggtactggtggatgcagtgggtcggggcggcaaggtgatcgcc
cgctccgccagcgatgccccggagatcgacggcgtggtccatctgggcagggcggcggga
ttgcaggtcggggactgggtggaggtggagatcacccgggcggatgcccatgatctgtat
ggggtgttggtgtcggactga
DBGET
integrated database retrieval system
