Alcaligenes faecalis JQ135: AFA_05280
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Entry
AFA_05280 CDS
T05446
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
afq
Alcaligenes faecalis JQ135
Pathway
afq00906
Carotenoid biosynthesis
afq01100
Metabolic pathways
afq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
AFA_05280 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
afq01006
]
AFA_05280 (hpnD)
Enzymes [BR:
afq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
AFA_05280 (hpnD)
Prenyltransferases [BR:
afq01006
]
Terpene biosynthesis
Squalene/phytoene synthase
AFA_05280 (hpnD)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Cep3
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ASR88911
UniProt:
A0A9N7DU28
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All DBs
Position
complement(1163481..1164344)
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AA seq
287 aa
AA seq
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MSPDEYCQNKAAQSGSSFYYAFLFLPPERRRAITALYAFCREVDDVVDEVHEESVARMKL
VWWRTQVADLYEGRAHHPVMQALAPHIEAFGLPQDELLAVIDGMEMDLDQMRYPSWSELE
RYCWHAASVVGLLSARIFGQTQEQTSDYAQKLGLAFQLTNIIRDVGDDARRGRIYLPQED
LDKFGVSPHEILDQQHSDRFEALMAFQTERAQDLYRQAMRALPAVDRRAQRPGLLMAAIY
HALLVEIANDRWHVLEQRISLTPIRKFWLAWKTWVSGGRSLQRKLGR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagcccagacgagtattgtcagaacaaggcagcccaaagcggctccagcttctactac
gcctttttgtttctgccgcctgagcgccgtcgcgccatcacggcgctgtacgcgttttgc
cgcgaggtggacgatgtcgtggacgaggttcacgaagagtccgtcgcccgcatgaagctg
gtgtggtggcgcacacaggtggctgatctgtatgagggccgtgcccatcacccggtcatg
caggccctggctcctcatattgaagcatttggtctgccacaggacgagttgctggccgtg
atcgacggcatggaaatggatctggaccagatgcgctacccaagctggagcgagctggaa
cgttactgttggcacgccgccagcgtggtggggctgctgtcggcgcgtattttcggtcaa
acccaagaacagaccagcgactatgcacagaagctgggcctggcatttcaactgaccaat
atcatccgcgacgtgggtgatgacgcccgtcgtggtcgcatctacttgccccaggaagat
ctggacaagtttggggtgtcgccccacgagattctggaccagcagcactcggaccgtttc
gaggccttgatggcttttcaaaccgaacgtgctcaggacctgtaccgacaagccatgcgc
gccctgcctgctgttgaccgtcgggcacaacgcccgggcctgttgatggcagccatctac
catgccctgctggtggaaattgccaatgatcgctggcatgtgctggaacagcgcatttcg
ctaacgcccattcgcaagttctggctggcctggaaaacctgggtatcgggtggccgcagc
ttgcaacgcaaactgggccgatga
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