Acidithiobacillus ferrooxidans ATCC 23270: AFE_1967
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Entry
AFE_1967 CDS
T00810
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr00540
Lipopolysaccharide biosynthesis
afr01100
Metabolic pathways
afr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AFE_1967 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
afr01005
]
AFE_1967 (rfaD)
Enzymes [BR:
afr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
AFE_1967 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
afr01005
]
Core region
AFE_1967 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
KR
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
ACK77892
UniProt:
B7JC62
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Position
complement(1719747..1720736)
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AA seq
329 aa
AA seq
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MYIVTGGAGFIGANLVQALNQRGITDILVVDHLSRADKFLNLTDLEIADYMEAEAFLRLI
ENKHLKGVEAVFHEGACSDTMATDGRYVMENNFTFSKVLLHWCQHHDVPFLYASSASVYG
MTGIFVEERYAESPLNVYGFSKFQFDQYLRQIWTDLRAPVHGFRYFNVYGPREFHKNRMA
SVALHFYNQYRLDNHVRLFAGSGSYADGEQRRDFIYIDDVVSVNMHFLDHPHSGIYNVGT
GQAQSFNEMAVAVINSLEHRANRPTLTLPALQKTQAIRYVNMPEALNGKYQSFTQAEISK
LRGAGYDRTFLTVGQGVDRYVQWLTERTT
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcgtcactggcggggccggttttatcggcgccaatctcgtgcaggccctcaat
caacggggcattacggatattctcgtcgtcgaccatctgagccgcgccgacaagtttctc
aatctcaccgatctggaaattgccgactacatggaggcagaggcttttcttcgactgata
gagaacaaacatctgaagggtgtcgaagccgttttccatgaaggcgcatgctccgatacg
atggcgacagatggccgttatgtcatggaaaacaacttcaccttcagcaaagtgctgctg
cattggtgccaacatcatgatgtccccttcctttatgcctccagcgcctcggtctacggc
atgactggtatctttgtcgaggagcgctacgccgaatcgcccctcaacgtctacggattc
agcaagtttcagttcgaccagtatctccggcagatctggacggatttgcgggcgccggta
catggctttcgttattttaacgtctacggtccacgcgagtttcacaaaaaccgcatggcc
tcagtagcgctgcatttttacaaccaatatcggctggacaatcatgttcgcctgtttgcc
gggtctggcagctatgccgatggtgaacaacggcgcgatttcatttatatagacgatgtg
gtttccgtcaacatgcatttcctggatcacccgcacagcggaatttacaatgtaggcaca
ggacaggcgcagagtttcaacgagatggcagtcgccgtcatcaatagcttggagcaccgc
gctaaccgcccgacactgaccctgcccgcactgcagaaaacgcaggccattcgttacgtc
aatatgcccgaagccctgaatggtaagtaccagagcttcacccaggcggaaatcagtaaa
ctgcgcggtgcaggatatgacagaacctttctgaccgtgggacagggggtggatcgctat
gtgcaatggctcacggaacggacgacctga
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