Aythya fuligula (tufted duck): 116487936
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Entry
116487936 CDS
T07966
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116487936 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116487936 (POLR1B)
Enzymes [BR:
aful01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116487936 (POLR1B)
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116487936 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
116487936
NCBI-ProteinID:
XP_032041076
UniProt:
A0A6J3CPT4
LinkDB
All DBs
Position
3:complement(12736938..12753431)
Genome browser
AA seq
1112 aa
AA seq
DB search
MRRRPRLRSGVQRDLPAAHIDSFNYAISEGVYQALQDIAPLEFALRDSRVSLAIAGAAIS
PPMVPKGAVCREVKVFPAECRGLRSTYRGKITVDISWSVNGVPQGTIKHPVGYIPIMVKS
KLCSLYNLSPQELIQRHEEEEEMGGYFIINGLEKVIRMLIMPRRNFPLAMTRHKWKNRGP
GFTEYGVVMHCVKEEHAAINMNLHYLENGCVMLNFIFQKELFFLPLGFALKALVNFTDYQ
IFKELVKDKENDTFYVNCVTEMLRAVADAGCYTQQNVLEYLGKSFRVKLNLPEWYSNEQA
ADLIFNKCICIHLTDKTEKFYLLCMMTRKLYAFAKGECMEDNPDSLMNQEVLTPGQLYLM
FLKERLENWLQSVRFVLEKRTEKADININADSLIKAFSMTADVTKAFEYLLATGNLRSKT
GLGMLQDSGLCVVGDKLNFVRYLSHFRCIHRGSAFAQMRTTTVRKLLPESWGFLCPVDTP
DGEPCGLMNHMTAVCEIVTEIVPVRDLPPLLCALGVVPIDATPSRPYAECYRVVLDGAVV
GWVEWDLAPQVAEALRRFKITQEKRFPARAEVVLIPMTGKPSLYPGLFIFTTPCRMVRPV
KNLLYGRKEWIGTLEQIFMNVATMESEVVPGVTTHLELFPHSILSVVANLIPFSDHNQSP
RNMYQCQMGKQTMGFPVYNYRDRSDNKLYLLHTPQSPLVRPRMYDFYSMDSYPVGTNAIV
AVISYSGYDMEDAMIVNKSSWERGFAYGSVIKMESIDLSLKANRGDDNLVFGARPGDPNV
AEKLDADGLPFIGSILQPGDPFYSYMNLNTGETFTVYYKNKEVGIVDNIKLCSNDRGTGK
LKKVCITLRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPFTENGMVPDILFNPHGFPSR
MTIGMLIESMAGKSAALHGVCYDATPFTFSEEDSALKYFGETLVSAGYNFFGTEKMYSGI
SGLELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDSVTNQPIKGRNVEGGIRFGEMERD
ALLAHGTSFLLHDRLFSCSDGSEAYVCTSCGSMLSPLLQRPPPSSVASNRRYSCLLCGRV
DTIQVIPVPHVFRYFVAELAAMNIKLRLTLEP
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggcggccgcggctccgcagcggggtgcagcgcgacctgcccgccgcccacatc
gactccttcaactacgccatcagcgagggggtgtaccaagcgctgcaggacatcgccccg
ctggagttcgccctgagggacagccgcgtgtcgctggccatcgccggcgccgccatctcg
ccgcccatggtgccgaagggggcggtgtgccgggaggtgaaggtgttccccgccgagtgc
cgggggctgcgcagcacctaccgcggcaagatcacggttgacatcagctggtcagtgaat
ggcgttccacaagggactattaaacatcctgtggggtatattccaattatggtgaagtct
aaattgtgcagcctctataatctgtctccccaagagctcatccaacgccatgaggaggaa
gaggaaatgggaggctacttcataattaatggcttagaaaaagttattagaatgctgatt
atgcccaggcgaaatttccctcttgcaatgacaagacacaagtggaaaaacagaggccca
ggcttcacagagtatggagtagtgatgcactgcgttaaggaggagcacgctgcaataaat
atgaaccttcactacttggaaaacggttgtgtcatgttgaacttcatttttcagaaagag
ttgttcttccttcccttgggatttgctcttaaggcattagttaatttcacagactaccag
atttttaaagagctggtcaaagataaggaaaacgacaccttttacgtgaactgtgttact
gagatgctgagagcagtagcggatgcaggctgttacacacagcaaaacgtccttgaatac
cttggaaagagcttcagagtaaaactgaacctcccagagtggtacagcaatgaacaggct
gcagatctcattttcaacaagtgtatctgcatacacttaacagacaaaactgagaagttc
tacctgctttgtatgatgacccgaaagctgtatgcttttgccaaaggagagtgcatggag
gataatcctgacagtctgatgaatcaagaagtgcttactccaggacagctttaccttatg
ttcttaaaggagaggcttgagaactggctgcagtctgttagatttgttttggagaagaga
acagaaaaggcagatatcaacataaacgcagacagcttgatcaaggcattcagcatgaca
gcagatgttaccaaggcatttgagtatcttcttgcaactggcaacctgcgatctaaaact
ggcctgggcatgttacaggacagcggtctgtgtgtggtgggagacaagctgaatttcgtt
cgctacctttcccacttccgctgcatacacagaggctcggcctttgcccagatgagaacc
acaactgtgcgcaagctgctgcccgaatcctgggggttcctgtgccctgtggacacccct
gatggagagccctgcggtctgatgaaccacatgacagctgtgtgtgaaatagtgacagag
atagtgcctgtgagagaccttccacctttgttatgtgccctaggtgttgtccccattgac
gcaactccaagtaggccttacgctgagtgttacagagtggtgctggacggcgccgtggtg
ggctgggtggagtgggacctggctcctcaggttgcagaagccctccgacgttttaagata
actcaagagaaaagatttcctgcacgggcagaagtggtccttatcccaatgacaggaaaa
cccagtctgtatcctgggttgttcatttttacaaccccttgccggatggtgcggcctgtc
aaaaacctgctgtacggaaggaaagaatggattggcactctggaacagatcttcatgaac
gtggccaccatggagtcagaggtggttcctggagtgaccactcacctggagctcttccct
cacagcattctgagcgtggtggccaacctcatccccttctccgaccacaaccaaagtcca
cgaaacatgtatcagtgccagatgggaaagcaaaccatggggtttccagtttataactac
agggaccgctcggataacaagctgtacctccttcatacgccccagagccctctggtgagg
cccagaatgtacgacttctacagcatggacagctacccagtcggtaccaacgccattgtg
gctgtcatctcctacagtggctatgacatggaagatgcaatgattgtgaacaaatcttcc
tgggagagagggtttgcttacggaagtgttatcaagatggagagcattgacctttccctt
aaagccaacaggggagatgataatttagtatttggtgccaggcctggtgacccgaatgtt
gcagagaagttagatgctgatggactgccttttattggctccatcctacagccaggggat
cccttctacagctacatgaacctcaacacaggggagaccttcactgtatactataagaat
aaggaggtgggcattgtagacaacatcaagttatgcagcaacgaccgcggcaccgggaaa
ttgaagaaggtttgcatcaccttgagagttccccgaaatccaactgtgggcgacaaattc
gccagccgtcacgggcagaaaggcatcctgagccagctgtggccggttgaagacatgccg
ttcacggagaacgggatggtcccagacatcctcttcaacccccacgggttcccctcccgt
atgaccatcgggatgctgatcgagagcatggcggggaagtcggcagcgctgcacggcgtc
tgctacgatgccactcccttcaccttctcggaggaggactctgctctgaaatacttcggc
gaaacgctggtgagcgcgggttacaacttcttcgggacggagaagatgtacagtgggatc
agcggcctggagctggaggcagatattttcgtgggagtcgtgtactaccagcgcctgcgc
cacatggtctcggacaagttccaggtgaggacgacgggccctcgggactccgtcaccaac
cagcccatcaaggggaggaacgtggaaggcgggattcgcttcggcgagatggagcgcgat
gcgctgctggcccacggcacctccttcttgctgcacgaccgcctcttcagctgctccgat
ggctccgaagcctacgtctgcacgagctgcggcagcatgctctctcctctgctgcagcgg
ccgccgccttcctccgtggcgagcaacaggaggtattcctgcttgctgtgcggccgggtg
gacaccatccaggtcatcccagtgccccacgtcttccgttacttcgtggcagagctggca
gccatgaacatcaagctgaggctgacgctggagccgtga
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