Aythya fuligula (tufted duck): 116488446
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Entry
116488446 CDS
T07966
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04010
MAPK signaling pathway
aful04210
Apoptosis
aful04218
Cellular senescence
aful04620
Toll-like receptor signaling pathway
aful04621
NOD-like receptor signaling pathway
aful04622
RIG-I-like receptor signaling pathway
aful04623
Cytosolic DNA-sensing pathway
aful04625
C-type lectin receptor signaling pathway
aful04920
Adipocytokine signaling pathway
aful05132
Salmonella infection
aful05164
Influenza A
aful05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116488446 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116488446 (NFKB1)
04218 Cellular senescence
116488446 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116488446 (NFKB1)
04621 NOD-like receptor signaling pathway
116488446 (NFKB1)
04622 RIG-I-like receptor signaling pathway
116488446 (NFKB1)
04623 Cytosolic DNA-sensing pathway
116488446 (NFKB1)
04625 C-type lectin receptor signaling pathway
116488446 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
116488446 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116488446 (NFKB1)
05168 Herpes simplex virus 1 infection
116488446 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
116488446 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aful03000
]
116488446 (NFKB1)
Transcription factors [BR:
aful03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
116488446 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
116488446
NCBI-ProteinID:
XP_032041858
UniProt:
A0A6J3CX26
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All DBs
Position
4:complement(6726248..6783059)
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AA seq
999 aa
AA seq
DB search
MAGEDPYIMGVSDPQMFAMDQFMGMNTIFNNTGYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSFPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
GHLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNGSFTRRLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
CSLEFSLLVSVSMTDKEEVQRKRQKLMPNFSDGYGGGSGAGGGGMYGGGGGGAGSGFSYP
SYGYSAFGGMHFHPGTTKSNAGMKHGNGLSNCTAEKDRKRSDKPSDKCNTEHDVKMETME
TNECRTSGVNEEKEEDASSCRGEVNEADCRWQDGPFLEKAMQLAKHHCNALFDYAVTGDV
KMLLAVQRHLTVVQDDNGDNVLHLAIIHLHTELVKNLLDVIPDLNYSDIINMRNDLYQTP
LHLAVITKQAEVVEDLLRAGADVSLLDRHGNSALHLAAAEGDDRILSLLLKHKKIPSMVD
LFNGEGLCAIHMVVMANSMSCLKQLIAAGVNVNAQEQKSGRTALHLAVELENIPLAGYLL
LETDVDVNSTTYDGTTPLHIAAGRGSTKLAAVLKAAGADPHIENFEPLFDLEDMKDDDDD
EGIVPGTTPLDMAANCEVYDILNDKPYKPAAAVSEDLLTQGHVRELNESVKMQLCKVLEV
RDPSKNWFTLAQKLGLGILCNAFRLCPSPSRTLLDNYEVSGGTIEELSAALRQMGHTEAI
EIIQNAQSISQRQPHQEDNTLEALLSSSPPTFAKRDTGEVYNSKFQDNESTCDSGVETSF
RKLSFTYSDSLNSKSSITLSKINLSYGHEGSVQSNYIAN
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaagatccctacattatgggagtgtcagatccccaaatgtttgcaatggac
cagttcatgggaatgaatacaatatttaataatacgggttacattacttcagacttacca
ctacgaacagcagacggaccatatcttcaaatcattgagcagccaaaacagaggggtttt
cgattccgatacgtatgcgaagggccttcacatggtggacttcctggtgcttccagtgaa
aagaacaaaaaatcattccctcaagtcaaaatttgcaattatgttggacctgcaaaagta
attgtccagttagttactaatgggaaatacgtccacttgcatgctcacagcttggtgggt
aaattttgtgaagatggagtatgcacagttaacgcaggacctaaagatatggttgtgggg
tttgcaaaccttggaatacttcacgtcacgaagaagaaggtgtttgaaactctggaaaca
cgcatgatagatgcttgcaaaaaaggatacaacccaggactcttggtgcatcctgaactt
ggccatctgcaggcagaaggatgtggagacagacagctaactgaacgagaaagagaaatt
attcgtcaggcagcagtacagcagactaaagaaatggatctcagtgtggtgcgtcttatg
tttacagcctttctccctgacagcaatggcagtttcacacggagacttgatcctgttata
tcagatgcaatatatgacagcaaagctcccaatgcctccaacttaaaaattgtaagaatg
gacagaacggcagggtgcgtaacaggaggggaagagatttaccttctctgtgacaaggtt
cagaaagatgacattcaaatacgtttctatgaggaggatgagaatggtggtatgtgggaa
ggctttggagacttttctcctacagatgtacataggcagtttgctattgtgtttaaaaca
cccaagtatcgagatgtcaacatcacaaagccagcctctgtatttgtacaactgcgtcgg
aaatctgatctggaaacaagtgaaccaaagccctttctttattatccggaaatcaaagat
tgctctctagagttttctctcctcgtcagtgtgagtatgactgataaagaagaagtgcaa
agaaaacgacagaagctcatgccaaacttctcagatggctacggtggaggcagcggcgca
ggaggaggtggcatgtatggcgggggaggcggcggggctggctctgggttcagttatcct
tcgtacggttactcagcttttggagggatgcatttccaccctggcacaacaaagtccaat
gctggaatgaaacatggcaacggactgtcaaattgcacggctgaaaaagataggaagagg
tctgataaaccaagtgacaaatgcaacacggaacatgatgtgaaaatggaaactatggag
acgaatgagtgcagaacctctggtgtaaatgaggagaaggaggaggatgcttcatcctgc
agaggtgaagtaaacgaagcagattgcaggtggcaggatggtcccttcctggagaaggcg
atgcagcttgccaagcaccattgcaatgctctctttgactacgctgtaaccggagatgtg
aagatgctgttggctgttcagcgccatctcaccgttgtccaggatgataacggagacaac
gtccttcatttagcaattatccaccttcacacggaactggttaaaaacctcttggacgtg
atcccagatttgaattatagcgacattatcaacatgaggaacgacctttatcagaccccc
ctgcacctggcagtaatcacaaagcaggcagaggtggtggaggacttgctgagggctgga
gcagatgtcagccttctggatcgccacggtaattctgccctacatttagctgctgctgaa
ggagacgacaggattttgagtctactcctcaagcataagaagataccttcgatggtcgac
cttttcaatggtgaaggtctctgtgcaatccacatggtggtgatggcaaacagcatgtcc
tgcctcaaacaactgatcgctgctggagttaatgtcaacgctcaggaacaaaaatctgga
cggactgcattgcatttagctgttgaactagaaaacatccccttggcgggctacctgttg
cttgagactgatgtagacgtgaacagcactacatatgacgggacaacacctcttcacata
gcagctggaaggggctctacaaaattggcagcagttctcaaagcagcaggtgcagatcct
cacatagagaactttgagccactgtttgatctagaggatatgaaagatgatgacgatgat
gaaggaatagtacctgggacaacaccactggatatggcagccaattgtgaggtatacgac
atattaaatgacaaaccttacaaaccagcagcagcagtttcggaggacttactgacacaa
ggacatgtaagagagctgaatgaaagcgtcaagatgcagctttgcaaagtactggaagta
cgggacccaagcaaaaactggtttactctagcacaaaagctgggtcttggcattctttgt
aacgccttcaggttgtgcccttccccctcaagaactctgctagataactatgaggtttct
ggtggtacaattgaagagctgagtgctgctttgagacagatgggtcacacagaagccatt
gaaatcattcagaacgcacaatccatctcgcaaaggcagcctcaccaggaggacaacaca
ttagaagctcttctttcatcatctccacccacctttgcgaagagagacacaggggaagtt
tataatagcaaatttcaagacaacgaaagcacatgcgacagcggtgtggagacctccttc
cgcaaactgagctttacttactcagactctctgaacagcaagtcttcaataacactcagc
aaaatcaacctcagctatggacatgaaggctcagtgcaaagcaattatatagctaactag
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