Aythya fuligula (tufted duck): 116496978
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Entry
116496978 CDS
T07966
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04020
Calcium signaling pathway
aful04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116496978 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116496978 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aful04040
]
116496978 (GRIN1)
Ion channels [BR:
aful04040
]
Ligand-gated channels
Glutamate (ionotropic)
116496978 (GRIN1)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
116496978
NCBI-ProteinID:
XP_032056336
UniProt:
A0A6J3DY85
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All DBs
Position
19:10891776..10926118
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AA seq
988 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTS
GIHFGYPRAVAEPDLVTPSPVGKVTLIGTKAIGEESLSAPAAERGRSPRLAAPAPWRLVL
PACANQQYHPTDITGQLNLSDPSVSTVV
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcggctgctgctgctcgccctactcttctcctcctccttcgcccgcgcc
ggctgcgaccccaagatcgtcaacatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcatggcacctggaagctgcagctc
aacgccacctcggtcacgcacaagcccaacgccatccagatggccctctccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcaccctcctgctcccaacgat
cacctaacaccaacacccgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcacg
gtcccaccatactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactgg
aatcacgtcattctgatagtcagcgacgaccacgaaggtcgtgctgcacaaaagaagctg
gagaccctcttggaggagagagagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgacccc
gggaccaaaaatgtgacgtcgctgctgctggaggctaaggagctggaggctcgtgtcatc
atcctctctgccagcgaggatgatgcggcaacggtgtacagatcagcagccatgctcaat
atgacgggctccggctacgtgtggctggtgggagaacgggagatctcaggcaatgccctg
cgctatgcccctgatggagtcatcggtttgcagctcatcaacgggaagaatgaatcagcc
cacatcagtgacgctgttgcagtggtggcccaggctgtgcacgacctgtttgaaaaggag
aacatcaccgacccaccgcggggctgcgtgggcaacaccaacatttggaaaacagggccc
cttttcaagagggtgttgatgtcctccaagtactcagagggcgtcactggccgggtagaa
ttcaatgaagatggggacaggaagtttgccaactacagcatcatgaacctgcagaaccgc
aaactggtccaggttgggatttacaacggcagccacgtcttgaccaatgaccggaagatt
atctggccagggggagaaactgagaaacctcaaggctatcagatgtcgaccaaattgaag
attgtgacgatccaccaagagccctttgtgtatgtgaagcccacgcaagcagatgggacg
tgcagggaggagttcaccatcaacggtgaccctgtcaaaaaggtcttctgcacggggccc
aacgagaccatcccaggccgccccaccgtggcactgtgttgttacggcttctgcattgac
ctgctcattcgcctggcgggggtgatgaacttcacttatgaggttcacctggtggctgat
ggtaaatttggtacccaagagcgggtgaacaacagcaacaagaaggagtggaacgggatg
atgggcgagctgttgagcgggcaggcggacatgattgtggctcccctcaccatcaacaac
gagcgggcacagtacatcgagttctccaagcccttcaagtaccagggtctgaccatcctc
gtgaagaaggaaatcccccgcagcacactggactcattcatgcagcccttccagagcaca
ctttggctgctggtggggctgtctgtgcacgtggtggcggtgatgttgtacctcttagac
cgattcagcccatttggccgcttcaaagtgaacagcgaggaggaggaggaagatgcccta
acactctcctcggccatgtggttctcctggggagtcctactgaactctggcatcggagaa
ggtgctccccggagtttctctgcccgtattcttggcatggtgtgggctggctttgctatg
attattgtggcttcctacactgccaacctggctgctttcctggtgttggaccgacccgag
gagagaattacaggcatcaacgacccccggctgcgcaacccctccgataagttcatttat
gccacggtgaagcagagctcggtggacatctacttccgacggcaggtggagctgagcacc
atgtaccggcacatggagaagcacaattacgagagcgctgctgaagccatccaggctgtg
cgggacaacaagctccatgccttcatctgggactcagcggtgctggagttcgaagcctcc
cagaagtgcgacctggtgacgacgggggagcttttcttccgctccggctttgggattggg
atgcgcaaggacagcccgtggaagcagaatgtctccctggccatcctcaagtcccatgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataag
gacgcgcggaggaagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaac
ctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcaccagc
gggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtccccc
gtcggcaaggtcacactcattggcacgaaagcaattggggaggaatcgttgtcagcgccc
gccgccgagcgcggccggtccccacggctcgctgcccccgcaccgtggcggctggtgctc
ccagcctgcgccaaccagcaataccatcccaccgacatcaccggccagctcaacctctcc
gacccctccgtcagcactgtggtgtga
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