KEGG   Aspergillus flavus: AFLA_005956
Entry
AFLA_005956       CDS       T01090                                 
Name
(GenBank) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
afv  Aspergillus flavus
Pathway
afv03020  RNA polymerase
afv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:afv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AFLA_005956
  09124 Replication and repair
   03420 Nucleotide excision repair
    AFLA_005956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afv03021]
    AFLA_005956
   03400 DNA repair and recombination proteins [BR:afv03400]
    AFLA_005956
Transcription machinery [BR:afv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     AFLA_005956
DNA repair and recombination proteins [BR:afv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      AFLA_005956
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-ProteinID: KAF7620654
LinkDB
AA seq 338 aa
MDYEMDIEPTGPQVTVREAEPYRVDFKLSSVDLAFANSLRRAMLAEVPTIAIDLVEVEKN
TSVLPDEFLAHRLGLIPLNSKNCDQDVEYTRDCECEDHCARCSVTLTLHARCTGDDIMRV
YARDLVVSGERANEWVGNPVITDPEGNGPLICKLRRGQELKMTCIAKKGIAKEHAKWMPT
AAVGFEYDPHNNLKHVDYWYEEDPIKEWPVSHNAAWEHAAPPDQPFDYDAQPNNFYIDVE
SVGVLEPDMIIQQGITVLQRKLASVISALSGTGDGDHNGVMGGEDEDMMGVRSPDAYEPP
EGIDGGFTAYANGGASAWGASAATPYGATPYGGGGYGF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggactatgaaatggacatcgagcctacagggccccaggtcacagtgcgagaggccgaa
ccctaccgagtcgatttcaaactcagctccgtcgatctcgccttcgccaactctctccgc
cgagccatgcttgctgaagttcccactattgctatcgacctagttgaagtcgagaagaat
acctctgtgcttccggacgagtttcttgcccaccgactgggtctcatccctcttaattcc
aagaactgtgaccaggacgttgagtacactcgcgactgcgagtgtgaggatcattgcgcg
cggtgcagcgtgacgcttactttacatgcgcgctgcaccggcgatgacattatgcgcgtg
tatgcgcgggatctggtggtcagcggtgagcgggcgaatgaatgggtcggaaacccggtt
atcactgatccagaaggcaatggacccctgatctgtaaattgcgacgtgggcaagagctt
aaaatgacatgtatcgccaagaagggtattgccaaagaacacgccaagtggatgcccacc
gcagcagttggtttcgaatatgacccgcacaataacctcaaacatgtggattattggtac
gaagaagatcctattaaagaatggcccgtctctcacaatgctgcatgggaacacgccgct
cccccggaccaacccttcgattacgatgcgcaacccaacaacttttatatcgatgtcgag
agcgtcggtgtcctcgaaccggatatgatcatccagcaagggatcacagttttacaacgc
aagcttgcgtctgttatttcggcactttctggcactggtgacggcgaccacaatggtgtt
atgggtggggaggatgaagatatgatgggtgtacgcagtccagatgcatatgagcctcca
gagggtattgatggaggcttcactgcttacgctaatggcggtgcaagtgcttggggagca
agcgcagcaaccccgtacggtgcaaccccgtatggaggtggtgggtatggtttttga

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