Aspergillus flavus: AFLA_005956
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Entry
AFLA_005956 CDS
T01090
Name
(GenBank) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
afv
Aspergillus flavus
Pathway
afv03020
RNA polymerase
afv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AFLA_005956
09124 Replication and repair
03420 Nucleotide excision repair
AFLA_005956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afv03021
]
AFLA_005956
03400 DNA repair and recombination proteins [BR:
afv03400
]
AFLA_005956
Transcription machinery [BR:
afv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
AFLA_005956
DNA repair and recombination proteins [BR:
afv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AFLA_005956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
KAF7620654
LinkDB
All DBs
AA seq
338 aa
AA seq
DB search
MDYEMDIEPTGPQVTVREAEPYRVDFKLSSVDLAFANSLRRAMLAEVPTIAIDLVEVEKN
TSVLPDEFLAHRLGLIPLNSKNCDQDVEYTRDCECEDHCARCSVTLTLHARCTGDDIMRV
YARDLVVSGERANEWVGNPVITDPEGNGPLICKLRRGQELKMTCIAKKGIAKEHAKWMPT
AAVGFEYDPHNNLKHVDYWYEEDPIKEWPVSHNAAWEHAAPPDQPFDYDAQPNNFYIDVE
SVGVLEPDMIIQQGITVLQRKLASVISALSGTGDGDHNGVMGGEDEDMMGVRSPDAYEPP
EGIDGGFTAYANGGASAWGASAATPYGATPYGGGGYGF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggactatgaaatggacatcgagcctacagggccccaggtcacagtgcgagaggccgaa
ccctaccgagtcgatttcaaactcagctccgtcgatctcgccttcgccaactctctccgc
cgagccatgcttgctgaagttcccactattgctatcgacctagttgaagtcgagaagaat
acctctgtgcttccggacgagtttcttgcccaccgactgggtctcatccctcttaattcc
aagaactgtgaccaggacgttgagtacactcgcgactgcgagtgtgaggatcattgcgcg
cggtgcagcgtgacgcttactttacatgcgcgctgcaccggcgatgacattatgcgcgtg
tatgcgcgggatctggtggtcagcggtgagcgggcgaatgaatgggtcggaaacccggtt
atcactgatccagaaggcaatggacccctgatctgtaaattgcgacgtgggcaagagctt
aaaatgacatgtatcgccaagaagggtattgccaaagaacacgccaagtggatgcccacc
gcagcagttggtttcgaatatgacccgcacaataacctcaaacatgtggattattggtac
gaagaagatcctattaaagaatggcccgtctctcacaatgctgcatgggaacacgccgct
cccccggaccaacccttcgattacgatgcgcaacccaacaacttttatatcgatgtcgag
agcgtcggtgtcctcgaaccggatatgatcatccagcaagggatcacagttttacaacgc
aagcttgcgtctgttatttcggcactttctggcactggtgacggcgaccacaatggtgtt
atgggtggggaggatgaagatatgatgggtgtacgcagtccagatgcatatgagcctcca
gagggtattgatggaggcttcactgcttacgctaatggcggtgcaagtgcttggggagca
agcgcagcaaccccgtacggtgcaaccccgtatggaggtggtgggtatggtttttga
DBGET
integrated database retrieval system