Antechinus flavipes (yellow-footed antechinus): 127539074
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Entry
127539074 CDS
T08818
Name
(RefSeq) aryl hydrocarbon receptor
KO
K09093
aryl hydrocarbon receptor
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04659
Th17 cell differentiation
afz04934
Cushing syndrome
afz05207
Chemical carcinogenesis - receptor activation
afz05208
Chemical carcinogenesis - reactive oxygen species
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
127539074
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
127539074
05208 Chemical carcinogenesis - reactive oxygen species
127539074
09167 Endocrine and metabolic disease
04934 Cushing syndrome
127539074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afz03000
]
127539074
Transcription factors [BR:
afz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127539074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
127539074
NCBI-ProteinID:
XP_051819017
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All DBs
Position
5:8788926..8844635
Genome browser
AA seq
1094 aa
AA seq
DB search
MSGAGGTHITYASRKRRKPVQKTVKPVPPEGVKSNPSKRHRDRLNTELDRLASLLPFPQD
VISKLDKLSVLRLSVSYLRAKSFFDVALKSCQDDRNGSRENNGARLQDSLCLQEGELLLQ
ALNGFVLVVTTDALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWMLNP
GQPADSVPQGQEGHGLPQPSGFYNPEQLPSENSPFLERCFICRLRCLLDNSSGFLAMNFQ
GRLKFLHGQNKKGKDGTSLAPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFTPTGC
DAKGKLVLGYTEAELCMRGSGYQFIHAADMLYCAESHIRMIKTGESGMTVFRLLTKENRW
TWVQSNARLVYKNGRPDYIIATQRPLTDEEGMEHLRKRGSKLPFMFATGEAILYEVTFSF
PVSMDPLLGRPKGPGAAKEPCHPSSLLGAMLQQDESVYLCPPAPRPPPLERGFASGPGEE
LDGLGSGEWPENLAGEAELGQGPQDRCGSFADELHSIMKGLGVSFDDLRRLQQEQFFRGD
VAEEDDIGDLDLTDEILTYVQSSLNKGPFSPSAAQPPLQPQPPLEPQHSLLQQPQHHLEQ
QPQHSLQPQHHLEQQPQHHLEQQPQHHLEQQAQHSLQPQHHLEQQAQHSLQPQHHLEQQA
QHSLQPQHHLEQQAQHSLQPQHHLEQQAQHSLQPQHHLEQQAQHSLQPQHHLEQQAQHSL
QPQHHLEQQAQHPLQPQHHLQQQQPQHSLQPQHHLQQQPQHSLQPQHHLQQQPQHSLQPQ
HHLQQQPQHHLQQQPQHPLQEQHHLQQQPQHPLQEQHHLQQQPQHSLQPQHHLQQPQPSL
QPEHPLLQQSEHPLLQQPQPPLQAQPPLQQPPVQEMPHIPSSSCMVQEQLEQQWRQQHLC
QKMKHLQVDGLLASWRPGEPEPFPCVQQEPCDVFPDPDFQSLPYTQSLMSCSQALFPQPA
PLDHLDFPVGSFEQSPFPMSHLGDFVSCLQQTPESTGYGGQLQPTLAAPSACYAGAVSMF
PCQPEDQASNMDPMQYNPMASNQHTLLNKNGLNGGILNETYPAQLNGLNNPQSAACLHQA
EARPFPDLPSNGLL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcgggcgggacccacatcacctacgccagccgcaagcggaggaagccggtg
cagaaaacagtaaagccagtgccaccggaaggagtcaaatcgaacccatccaagagacac
agagaccggctgaatacagagctagaccggctggccagcctgctgcccttcccccaggat
gtcatctccaagctggacaagctgtccgtgctcagactcagcgtcagctacctgagagcc
aagagcttctttgatgttgcattaaaatcttgccaggatgaccggaatggaagtcgagag
aacaatggagccagactccaagatagcttgtgcttgcaggaaggggagctcctgctgcag
gccctcaatggctttgtgttggtcgtcaccaccgacgcgctggtcttttacgcctcctcg
acgatccaggactacttgggcttccaacagtctgacgtcatccatcagagcgtgtatgag
ctcatccacaccgaggacagagctgagttccagcgtcagctgcactggatgttgaacccc
ggccagccggcagactcggtgccccaaggacaagaaggccacgggctcccccagccctcg
ggcttttataacccggagcagcttccttccgaaaactctcctttcctggagagatgcttc
atctgccgcctgcgctgtctcctagataattcatcaggcttcttggccatgaactttcaa
gggcgtctcaaattccttcatggtcagaacaagaagggcaaagatggaacctccctggct
cctcagctggctctgttcgccgtggctacgccgttgcagcctccgtccatcctcgaaatc
cggaccaagaactttatcttcagaaccaaacacaaactggacttcactcccacaggctgt
gatgccaaaggaaaacttgttttggggtacactgaggcagagctgtgcatgaggggatcc
gggtatcagtttatccatgctgctgacatgctgtactgtgcagaaagtcatatccggatg
attaagaccggagaaagcggcatgacagtgtttaggcttctcaccaaagagaatcgctgg
acctgggttcaatccaacgcccgtttagtctataagaatggaaggccagattacatcatc
gccacgcaaagaccactcacggatgaggagggaatggaacatttgcggaagcggggttcc
aagctgccgttcatgttcgccacgggagaggccatactctacgaggtcaccttctctttc
cccgtgtccatggaccccctgctgggccggccgaaggggccgggggccgccaaggagccc
tgccatcccagctccctgctgggcgccatgctgcagcaagacgagtccgtgtacctctgc
ccgcccgcgccgcggcccccgcccctagagaggggctttgcttcggggccgggggaggag
ctggacggcctggggagcggtgagtggcccgagaacctggcgggggaggccgagctgggg
caggggccccaggaccgctgcggctcttttgcggacgagctgcacagcatcatgaagggc
ctgggcgtcagcttcgacgacctgaggcgcctgcagcaggagcagttcttccgaggtgac
gtggctgaggaggatgacatcggggacctcgacctgactgatgaaatcctgacctatgtt
cagtcttctttgaacaagggccccttctccccttcggctgcccagccccctctgcagcct
cagccccctctggagccccagcattctctgctgcagcagccccagcatcacctggaacag
cagccccagcattctttgcagccccagcatcacctggaacagcagccccagcatcacctg
gaacagcagccgcagcatcacctggaacagcaggcccagcattctttgcagccgcagcat
cacctggaacagcaggcccagcattctttgcagccgcagcatcacctggaacagcaggcc
cagcattctttgcagccgcagcatcacctggaacagcaggcccagcattctttgcagccg
cagcatcacctggaacagcaggcccagcattctctgcagccccagcatcacctggaacag
caggcccagcattctttgcagccgcagcatcacctggaacagcaggcccagcattctctg
cagccgcagcatcacctggaacagcaggcccagcatcctttacagccgcagcatcacctg
cagcagcagcagccccagcattctctgcagccgcagcatcacctgcagcagcagccccag
cattctctgcagccgcagcatcacctgcagcagcagccccagcattctctgcagccgcag
catcacctgcagcagcagccccagcatcacctgcagcagcagccccagcatcctttgcag
gagcagcaccacctgcagcagcagccccagcatcctttgcaggagcagcaccacctgcag
cagcagccccagcattctttgcagccgcagcatcatctgcagcagccccagccttctttg
cagccggagcatcctttgctgcagcagtctgagcatcctttgctgcagcagccccagcct
cctctgcaggcccagcctcctctgcagcagccgccagtgcaggagatgcctcacatcccc
agctccagctgcatggtccaggaacagctggaacagcagtggcggcagcagcatctctgt
cagaaaatgaagcacttacaagtggatggtttgctggccagctggagaccgggcgagccc
gagcccttcccctgcgtccagcaggagccctgcgatgtctttccagacccggatttccag
tctctgccctacacccagagcttgatgtcctgctcccaggcgctcttcccccagccggct
cccctggatcacctggactttcctgtaggaagttttgaacagtctccgttcccgatgtct
cacttaggagactttgtcagctgcttgcagcaaaccccagaaagcacaggctatgggggc
cagctgcagcccacgctggcggccccttcggcctgttatgcgggtgctgtctccatgttt
ccgtgccagcccgaagaccaggcttccaacatggatccgatgcagtataaccccatggcc
tccaatcagcacacattgttaaacaagaatggtttaaatggaggcattttaaatgaaacc
tacccagctcaattaaacggcctgaacaaccctcaatctgccgcctgtctccaccaagcg
gaggccagacccttcccagatctgccctccaatgggctcctctga
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