Antechinus flavipes (yellow-footed antechinus): 127544125
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Entry
127544125 CDS
T08818
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afz03016
]
127544125
Enzymes [BR:
afz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
127544125
Transfer RNA biogenesis [BR:
afz03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
127544125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
127544125
NCBI-ProteinID:
XP_051826579
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Position
1:complement(542172331..542820188)
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AA seq
577 aa
AA seq
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MPAASCDSPLEDIEDIVSREDSKPHDRYFSRKSIVPKVRIRNTQKCLQEEDDPPNDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENPSEADLWLLNSCTVKNPAEDHFRN
SIKKAQEEDKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKSNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVDR
AKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRVGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVADFKRVVDFLKENVPGITIATD
IICGFPGETDQDFQDTMKLVKDYKFPSLFINQFYPRPGTPAAKMQQVPAHVKKQRTKDLS
QLFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNQFYEQVLVPKNPMFMGKMVEVDIYE
SGKHFMKGQPVFNAKVYTPSISKPLAKGEVSGLTEEFRHVLENGSRTKGNMSAETLEEPL
GSRIGVLWAFQDGGLKTLSVGLLLLALLIAFFIKTPQ
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcatcctgtgattcaccacttgaagatatagaagatattgtgtcaagagaa
gattcaaagcctcatgatagatatttttcaagaaaaagtattgttccaaaggtgcgaata
cgtaatacccaaaaatgtttgcaagaggaagatgatccaccaaatgatagtactattcct
ggtattcagaaaatttggatacgcacatggggttgttcccacaataattcagatggagaa
tatatggctggtcaactagctgcttatggatataaaattacagaaaatccatcggaagct
gatttgtggctgttaaatagttgcacagtgaaaaatccagctgaagatcactttagaaat
tcaattaaaaaagctcaagaggaagacaagaaagtggttttagctggatgtgttcctcaa
gcacagcctcgtcaggactaccttaaaggcctgagtatcataggggttcagcaaatagat
cgtgtagttgaagttgtggaagaaaccatcaaaggtcactctgtgagactcctgggtcaa
aagaaatccaatggaaaacgtttggggggagctcgtttggatttgcctaagataagaaaa
aatccactgatagaaataatttctatcaatacagggtgtctcaatgcttgtacctactgc
aaaaccaaacatgccagaggaaatttggctagttatccaattgatgaactagtagataga
gccaaacagtcttttcaagagggtgtctgtgagatatggctgaccagtgaagacacaggg
gcttatggcagagatattggcaccgacctccctacactgctgtggaaactagttgaagtg
attcccgagggagctatgctgagagttggcatgacaaatcctccctatattttagagcat
ctggaggaaatggcaaaaattcttaatcatccacgagtctatgcttttctgcatatacca
gtacaatctgcctctgacagtgtgttaatggaaatgaaaagagaatactgtgtggcagac
ttcaaacgagtagtggattttctgaaagaaaacgttccaggaataaccattgctacagat
atcatttgtggttttcctggagaaacagatcaagattttcaagataccatgaaattggtt
aaagactataagtttcccagcctttttattaatcaattttatccacgaccagggactcct
gctgcaaaaatgcaacaagttccagcacatgtgaaaaaacaacgaacaaaagacctttct
cagttgtttcattcatataatccatatgatcataagattggtgaaagacagcaagtacta
gtaacagaagaatcctttgattccaagttttatgttgcacacaatcaattctatgagcag
gtgcttgtgccaaagaaccccatgttcatggggaaaatggttgaagtagacatttatgaa
tcaggaaaacattttatgaaggggcagccagtattcaatgccaaggtgtacaccccatcc
atcagtaaaccattagcaaagggagaagtttctggcttaacagaggagttcagacacgtg
cttgaaaatggctcaagaacaaaaggaaacatgtctgcagagactctggaagaaccacta
ggttccagaataggagtgctctgggcattccaagatggtgggctaaagacattgtcagtg
ggcttgcttctgctagctcttcttattgccttttttattaagactcctcagtag
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