Antechinus flavipes (yellow-footed antechinus): 127547456
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Entry
127547456 CDS
T08818
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127547456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127547456
Enzymes [BR:
afz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127547456
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
127547456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
127547456
NCBI-ProteinID:
XP_051830346
LinkDB
All DBs
Position
2:complement(33125112..33187502)
Genome browser
AA seq
1726 aa
AA seq
DB search
MQASKEVPWRRLRGISFGMYSAEELRKLSVKAITNPRYVDHVGNPSVNGLYDLSLGPADS
KEACSTCVQDFGSCPGHLGHIDLPLVVYNPLLFDKLYLLIRGSCLNCHLLTCPRPVVHLL
YCQLRVLEVGALQGVYELESTLNRFQDENPNASVCEMQEELEEHTRAILENNLLGAQGSQ
VKNVCESKSKLIAHFWKAHMASKRCPHCKTGKSVVRKEHNSKLTVTYPAVVHKKAKGTED
RAKTVQAPEIDDAHLGKRGYLTPSTAREHVLALWENEGFFLNYLFSGVEEPGMESKFNPN
IFFLDLVVVPPSRYRPVNRLGDQMFTNGQTVNLQAVLKDVVLIRKLLALMAQEQALPSEG
IGATEKEIQNGSPEEAEPSVPMDRSFLATIPGQSLTEKLYGMWIRLQSHVNIVFDSDMDK
LMMEKYPGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTY
PQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSTTDLTQREAVAKQLLTPAPG
GPKPQGAKVVCRHVKNGDVLLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNAD
FDGDEMNAHFPQSELGRAEACVLACTDEQYLVPKDGQPLAGLIQDHMVSGARMTTRGCFF
TREQYMELVYRGLTDRVGRVKIFPPAILKPCALWTGKQVVSTLLVNIIPENHIPLNLIGK
AKISGKAWIKQGALAAPGGALDAMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEV
YGGETSGQVLTCLARLFTAYLQLYRGFTLDVEDILVRPRADAKRLAVIEESSHCGSRAVR
AAFNLPDTASAEDMQTKWQDAHLSKDQRDLNMVDLKFKEEVNHYSNEINKACMPFGLHRG
FPENNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFEPYEVTPRSG
GFVTGRFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVR
DSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLLSNYEAIRKSKHLDEVLSKMDPTQARQH
ARALRKWRTKHPPSCPRRGAFLSYSQKVQAAVQALSLSGGNQNGRDPRAQQILKMWNELD
EKSRRKFVKKALPCPDPSLGVWRPDIHLASVSETFESQVDAYTQQWAAQPERSREKSELS
LDRLKTLLHLKWQRALCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRL
REILMVASSNIKTPMMSVPVLNTKKALKKVKSLKKKLTRVCLGEVLQKVDVQESFCMEEK
RSKYRVYCIRFNFLPYKYYQQEKYLRPTDILHFVETRFLKLLLEAIKRKSSKVSSFKAVS
TRRATQQDLDSAGETSGNREEREGAEDEEQIVDGDAEEGDADATDKKWKKKQEEEVDYES
EEEEQEEENEEDNEREEEGAEGGPDQGPRPEEGPQGPEAEQPEAPSPGPGKRRARSQGTC
GPEAEQRAQAVRNLHSSIQDYQFDVDEGLWCQVTLKLPLMKVHFDLCSLVVSLAHSAVLY
ETRGITRCLLNETTNKNQEKELVLNTEGINLPELFKYADVLDLRRLYSNDIHAMANTYGI
EAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSNSSPLQQMTF
ETSFKFLKEATMMGAHDELRSPSACLVVGKVVKGGTGLFDLKQPLR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctccaaggaggttccctggcggcgccttcggggcatttctttcgggatgtac
tcggccgaggagctccggaaattaagcgtcaaagccatcacaaaccctcgctatgtggac
cacgtggggaacccctcagtgaacggtctctacgacttgtccctgggaccggccgactcc
aaggaggcgtgctccacctgtgtgcaggactttggcagctgccccgggcacctgggccac
atcgacctgcccctggttgtctacaaccctctgctctttgacaaactctacctgctgatc
cggggctcttgtctgaactgccacctgctgacctgcccccggccggtggtccacctcctc
tactgccagctgcgggtgctcgaggtcggggcccttcaaggagtctatgagctcgagagc
accttgaacaggtttcaagatgagaaccccaatgcttccgtctgcgagatgcaggaagag
ctcgaagagcacactcgagccatcctggagaacaatctgctgggggcccaaggatcccag
gtgaagaacgtttgtgagagtaagagcaagctgattgcccacttctggaaggcacacatg
gcttctaagaggtgtccccactgcaagactgggaagtcggtggttcgcaaggagcacaac
agcaagctgactgtcacctaccctgccgtggttcacaagaaggccaagggcactgaggac
agagccaagactgtccaagccccagaaatcgacgacgcccatttagggaagaggggctac
ttgacgcccagcactgcccgtgagcatgtcttggccctttgggagaacgaaggtttcttt
ctgaactaccttttctccggagtagaggagcctggcatggagtccaaattcaatccaaat
atcttctttttggatcttgtggtggtgccgccttctaggtaccgccctgtcaaccgcctc
ggggaccagatgtttaccaacggccagacagtgaacctgcaggctgttttgaaggatgtg
gtcctgatccgaaagcttctggctctgatggcccaagaacaggccctgcccagtgagggc
ataggagcgacagagaaggagatccagaatggctccccagaggaggcagagccttcagtt
ccgatggaccgctcctttcttgccacgattccgggccagtctctcacggagaaactgtac
ggcatgtggatccgccttcagagccacgtgaacattgtgtttgacagcgatatggacaag
ttaatgatggagaagtaccctggcatccggcagatcctggagaagaaggaaggcttgttt
cggaagcacatgatggggaagcgcgtcgactacgctgctcgttcagtcatctgcccagac
atgtacattaacaccaacgaaattgggatccccatggtgtttgccacgaagctcacctac
cctcagcccgtgaccccgtggaacgtccaggagctgaggcaggccgtcatcaacggcccc
aacgtgcacccgggggcctcgatggtgatcaacgaggacggcagccgcacggcgctcagc
accacggacctgacccagcgggaggccgtggccaagcagctgctcacccccgcccctggc
ggccccaagccccaaggggcaaaggtggtttgtcggcacgtgaagaatggggatgttctg
ctgctgaaccgccagcccaccctgcacagaccctccatccaggcccaccgggcccggatc
ctgcccgaggagaaggtcctgcgcctgcactacgccaactgcaaggcctacaacgccgac
ttcgacggggacgagatgaacgcccacttcccccagagcgagctgggccgggccgaggcc
tgcgtcctggcctgcaccgacgagcagtacctggtgcccaaggacggccagccgttggct
ggattgatccaggatcacatggtctccggcgccaggatgacgacccgcggctgcttcttc
acccgggagcagtacatggagctcgtgtaccgaggactgacggacagagtggggcgggtg
aaaatcttccctcctgccattctcaagccctgtgcgctgtggacaggaaagcaggttgtc
tctacgttgctagtaaacataatcccagagaaccacatccccttgaatttgattgggaaa
gccaaaatcagcgggaaagcctggatcaagcaaggcgccctcgctgcgccaggtggtgcc
ctggacgccatgtgtgagtcccaggtcatcatccgagaaggggagctgctctgtggggtc
ttggacaaggcccactatggcagctctgcctatggccttgtccactgctgttacgaagtc
tacgggggggaaacgagcggccaggttctcacgtgcctggctcgcctcttcacggcctac
ctgcagctctacaggggcttcaccctggacgtggaagacattctggtcagaccccgggca
gacgccaagaggctggcggtcatcgaggagtcctctcactgcggctcccgggccgtcagg
gccgccttcaacctccctgacacggcgtcagccgaggacatgcagaccaagtggcaggac
gcccatctcagcaaagaccagagggacttgaacatggtcgatctcaagttcaaggaggaa
gtgaatcattacagcaacgagattaacaaggcctgcatgcccttcggcctgcacagaggc
ttcccggagaacaacctgcagatgatggtgcagtccggagccaagggatccactgtgaac
acgatgcagatttcctgtctgctcggccagatcgagctggaggggaggaggcccccgctg
atgccctctgggaagtccctgccctgcttcgagccctacgaagtcacgccgcgctcgggg
ggcttcgtcaccggccgcttcctcacaggcatcaggccgcccgagttcttctttcactgc
atggcgggccgagagggcctggtagacacagccgtcaaaaccagccgatcggggtacctg
cagaggtgcatcatcaaacacctggaggggctggtggttcagtacgacctcacggtgcgc
gacagcgacggcagcgtggtccagttcctgtacggagaggacgggctggacatccccaag
acgcagttcctgcagcccaagcagtttcctttcctcctcagtaactacgaggcaatacgg
aaatcaaagcatctggatgaagttctatccaaaatggaccccacgcaggcccggcagcac
gccagggccctcaggaagtggcgcaccaagcaccctcccagctgccccaggcggggcgcc
ttcctcagctactcccagaaggtgcaggcggctgtgcaggccctgagcctctcggggggg
aatcagaatggccgggaccccagggcgcagcagattttaaaaatgtggaatgagctggat
gagaagagccggaggaagtttgtaaagaaagccctcccttgcccggatcccagcctgggc
gtctggcgcccagatatccacttggcttccgtctcagaaacctttgaaagccaggtggat
gcttatacccagcagtgggcggctcagcccgagaggagccgcgaaaagtcagagctttct
ctcgacaggttgaagaccttgctccatctgaagtggcagcgggcactgtgtgaccccggg
gaagcagtgggtctcctggccgcccagagcatcggagaaccttccacacagatgaccctg
aacactttccactttgccggcagaggagagatgaatgttaccctgggaattccaagattg
agggagatcctcatggtggccagctcaaacataaagacacccatgatgagcgtgccggtg
ctcaacaccaagaaggccctgaagaaggtcaagagcctgaagaagaagctgaccagagtg
tgcttgggcgaggtactgcagaaagttgatgtccaagagtccttctgcatggaagaaaag
agaagcaaataccgggtctactgcattcgctttaatttcctcccctacaagtattaccag
caggagaagtacctgcgacctacagacattctgcattttgtagaaacaaggttccttaag
ctgctgctggaggccatcaaaaggaagagcagcaaggtgtcgtccttcaaagctgtgagc
acgcggagggcgactcagcaggatctggacagcgccggggaaacgtcgggaaaccgggag
gagcgggagggggccgaggacgaggagcagatcgtggacggggacgccgaggaaggggac
gctgacgctacggacaagaagtggaagaagaagcaggaggaagaggtagactatgagagt
gaggaagaggagcaggaagaggagaacgaagaggacaacgagcgggaggaggagggtgcc
gagggcggccctgaccaggggccccggcctgaggagggcccccagggcccggaggccgag
cagccggaggctccctccccggggcctggcaagaggcgggcacgcagtcaggggacctgc
gggccggaggcggagcagagagcccaggccgtgcggaacctccactcgtccatccaggac
taccagttcgacgtggacgagggcctctggtgccaggtgaccctgaagctgccgctgatg
aaggtgcactttgacctgtgctcgctggtggtctccttggcccacagtgccgtcctctat
gagaccaggggaatcacccgctgcctcctcaacgagaccaccaacaaaaatcaggagaag
gagctggtcctgaacacggagggcatcaacctgcccgagctcttcaagtacgcggacgtg
ctggaccttcgccgcctctattccaacgacatccacgccatggctaacacgtacggcatc
gaggccgccctgcgcgtgatcgagaaggaaatcaaagacgtgttcgccgtctacggcatt
gccgtggacccccggcacctctccctggtggccgattacatgtgcttcgagggcgtttac
aaaccgctgaaccgattcgggattcagtccaactcctcccctctgcagcagatgacattc
gagaccagcttcaagttcctgaaggaggccaccatgatgggtgcccacgacgagctgagg
tcgccttcggcctgtctggtggtcgggaaggtggtcaagggcgggacgggcctgttcgac
ctgaagcagccgctgagatag
DBGET
integrated database retrieval system
