KEGG   Antechinus flavipes (yellow-footed antechinus): 127548062
Entry
127548062         CDS       T08818                                 
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz01524  Platinum drug resistance
afz03430  Mismatch repair
afz05200  Pathways in cancer
afz05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:afz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    127548062
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127548062
  09162 Cancer: specific types
   05210 Colorectal cancer
    127548062
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    127548062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afz03400]
    127548062
DNA repair and recombination proteins [BR:afz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     127548062
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP
Other DBs
NCBI-GeneID: 127548062
NCBI-ProteinID: XP_051831190
LinkDB
Position
2:93918204..93951000
AA seq 1399 aa
MSRQSTLFSFFPKSPALCSNNKAAAIAADGSGAGAGAGASGIEGVGRAGVSGASSACGDA
ARSEEARPSPDPAAGSGPGPHVPSPRSSSGVAPLPREIKLNGGPRRRPTGVPTPAPAPAP
AAPPASSCDFSPGDLVWAKMEGYPWWPCLVYNHPTEGTFIRERGKTFRVHVQFFDDNPVR
GWVNKRLVKPYTGSKCKEAQKGGPFYTAKPEILRAMQLADDAISIEKSKRLELAVCDEPS
DPDEEEMEVAIASASDNSGEDLESEEEVRPKRQMAKRSTARNKKRRVVSDSESDIGGSDV
EFKPDTKEEGSSDEASSGMGESDSDMDSPVKAAPKRKRGTAVNSSLKRKSLGGCASTVPK
RVVGVSSETKNTLNAFSAPQNFEAQAQVSGGGDGSCGSTQWYHETLEWLKEGKRKDACRR
RPDHPDYDPNTVHVPEDFLNTCTPGMRRWWQIKSQNFDLVIFYKVGKFYELYHMDAIIGV
NELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKLAHISR
FDRVVRREICRIITKGTQTYSVLDGEPSESNNKYLLCVKEKEEEASGHMRLYGVCFIDTS
VGKFYMGQFSDDRHCSRFRTLVAHYTPAQILFEKGNLSAETRKVLKVSLSSSIQESLTPG
SQFWDAAKTLRTLLEEGYFKEKLNVTDGVVLPPVLKSMTSESDTIGLTPNEKSELALSAL
GGCVFYLKKCLIDYELLSMANFEEYIPVDADMVKAVKPGAIFAKRDCRMVLDAVTLSNLE
ILQNAVNGSTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPSSINDRLDAMEDLMAVPDK
ISEVVDLLKKLPDLERLLNKIHSVGSPLKSQKHPDSRAIMYEETTYSKKKIVDFLSALEG
FKVMCKIVGIMEEVVDNFKSKILKQVITLRTQNSGGRFPELTTELNRWDTAFDHEKARKT
GIITPKTGFDSDYDQALVDIKDNEQSLLDYLEKQRKRIGCRSIVYWGVGKNRYQLEIPES
FTLHDLPGEYELKSTKKGCKRYWTKDIEKKLADLMNAEERRDVSLKDCMRRLFFNFDKNY
RDWQTAVECIAVFDVLLCLANYSRGGEGHMCRPVILVPDEETRPFLKLKGSRHPCVTNNF
FGDDFIPNDIMIGCKEEDSEDGTWDAYCVLVTGPNMGGKSTLMRQAGLLLIMAQMGCYVP
AEVCSFTPVDRVFTRLGASDRIMSGESTFFVEMNETASILQHATEHSLVLMDELGRGTAT
FDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVCLGHMACMVENECEDPSQE
TITFLYKFTKGACPKSYGFNAARLACLPEEIIQKGHRKAKEFEKMTQSLRLFREVCLALE
NSAADIQAIHKLLTLIKEI
NT seq 4200 nt   +upstreamnt  +downstreamnt
atgtcgcgacagagcaccctattcagcttcttccctaagagcccggcgctgtgcagcaac
aacaaggccgccgccattgctgcggatggaagcggcgctggggctggagcgggggcttca
gggattgagggggttgggcgggccggagtctccggggcctcctcagcttgcggagacgcg
gcccggagcgaagaagcccgtccgagtcctgaccctgctgctggctcaggccccggccct
cacgtccccagcccccgctccagctctggggtcgccccgctgccccgagagataaaactg
aatggagggccgcgccggcgaccgactggagtgccgaccccggctccagccccagccccg
gctgctcctccagccagctcttgtgacttctctcctggtgatttggtttgggccaagatg
gaaggttacccctggtggccttgccttgtgtataaccatcccactgaaggaacattcatc
agagaaagggggaaaactttccgtgtccatgtacaattttttgatgacaatccagtaagg
ggctgggttaacaaaaggcttgtaaagccctatacaggttcaaaatgtaaggaagcccag
aaaggaggtcctttttatactgcaaagcctgaaatactcagagcaatgcaactggcagat
gatgccataagtatagagaagagtaagcggcttgaattagcagtatgtgatgagccttca
gatccagatgaggaggagatggaggtggctatagcttctgcatcagataatagtggagag
gatctagagagtgaagaggaagtgagacccaagaggcagatggctaagcgtagcacagcc
cggaacaaaaaaaggagagttgtttcagactcggagagtgacattggtggctctgatgta
gaatttaagccagataccaaggaggaagggagcagtgatgaagcaagcagtggaatgggt
gaaagtgatagtgacatggacagtcctgtcaaagctgccccaaaacggaaaagaggaact
gctgtcaacagctccctcaagaggaaaagtttgggaggttgtgcttctactgtacccaaa
cgagtagtaggagtttcttcagaaactaagaacactttgaatgctttctctgctccacag
aactttgaggcccaagcccaagttagtggaggtggtgatgggagctgtggctctactcag
tggtaccatgaaacactagaatggttaaaggagggaaagaggaaagatgcatgcaggagg
cgtccagatcatcctgattatgacccaaacactgttcatgttcctgaggatttccttaat
acctgtactccaggaatgagaaggtggtggcaaatcaagtctcagaactttgacctagta
atcttctataaagtagggaagttctatgaactgtaccacatggatgcaatcattggggtc
aatgagctggggctagtgtttatgaaaggcaattgggcccattcaggtttcccagaaatt
gcatttggtagatattcagattccctggttcagaagggttacaaagttgctcgagttgag
cagacagagactcctgaaatgatggaagctcgctgtcgaaagttggctcatatatccaga
tttgatagagtggtgcggagagaaatatgcagaattattaccaagggaacgcagacttat
agcgtgctggatggtgaaccttctgaaagcaacaataaatatttgctatgtgtcaaagaa
aaagaggaggaagcttctggtcacatgcgtctgtatggtgtttgctttattgacacttct
gtgggcaagttttatatgggtcaattttcagatgaccgtcattgctcccgatttaggact
ctggtggcacattatactcctgcacaaatattgtttgagaaaggaaatctctctgctgaa
acaaggaaggtcctgaaagtgtctctatcttcttccattcaagaaagtctgactccaggc
tctcagttttgggatgcagccaaaaccttgagaacactccttgaagaaggatactttaaa
gaaaagctaaatgtgactgatggggtagtattaccccctgtgcttaaaagcatgacatca
gagtctgacaccattggcttaacccctaatgagaagagtgaactggcattgtctgctttg
ggtggttgtgtcttctacctcaaaaaatgccttatagattatgagcttttgtctatggcc
aactttgaagaatacattcctgttgatgctgatatggtaaaagctgtaaagcctggtgcc
atctttgctaagagagattgtcgaatggtactagatgctgtgaccctaagcaatctggag
attctccagaatgcagtaaatggctccactgaagggacactgttagagaggattgatagt
tgctgtactccctttgggaagcggctcctaaaacagtggctttgtgctccgctttgtaac
ccatcctctatcaatgatcgtttagatgcaatggaagatctcatggctgtgcctgacaag
attagtgaagtagttgaccttctgaagaagcttccagaccttgagagactgttgaacaag
attcatagtgttggctctccactaaagagtcagaagcatccagacagcagagccataatg
tatgaagaaaccacttacagcaaaaaaaagattgttgatttcttgtccgctctggaagga
ttcaaagtgatgtgcaagattgttgggattatggaagaagtagtagataatttcaagtct
aaaatccttaagcaagttattacactccggactcaaaattcagggggtcgtttccctgag
ttgaccacagaattgaatcgatgggatacagcctttgaccatgaaaaagctcgaaagact
ggaattattactcctaaaacaggatttgactctgattatgaccaagcattggttgatatt
aaggacaatgagcagagccttttagactatttagagaaacagcgcaaacggattggctgc
aggtccatagtctattggggtgttgggaaaaatcgttaccaattggaaattccagaaagt
ttcacattgcatgatttgccaggggaatatgaactaaagtccaccaagaagggttgtaaa
cgatactggacaaaggacattgagaagaagcttgctgatctgatgaatgctgaagaacgg
agagatgtatcactgaaggattgtatgagaagactcttctttaattttgataaaaattac
agggactggcagactgctgtggagtgcattgcagtgttcgacgtcttattatgcttggcc
aactatagtcgaggtggtgaaggtcatatgtgtcgtccagtaatcctagtaccagatgag
gagactcgaccctttttaaagcttaaaggatctcgacatccatgtgttacaaataacttt
tttggtgatgattttattcctaatgacattatgataggctgtaaggaagaagattcagaa
gatggtacctgggatgcttattgtgtgctggttactggaccaaatatggggggcaaatca
accctcatgagacaggctggtcttttgcttataatggctcagatgggctgttatgttcct
gctgaagtttgtagtttcacaccagttgatagagtgttcactagattaggtgcttcagac
agaataatgtcaggtgaaagtaccttttttgttgaaatgaatgagactgccagcatacta
caacatgcaacagaacattccttggtgctcatggatgaactaggtagaggcactgcaact
tttgatggtacagctatagcaaatgcagttgttaaagaacttgccgagaccataaagtgt
cgtactttattttctacacactaccattcattagtagaggattactcccaaaatgttgct
gtgtgcctaggacacatggcatgcatggttgaaaatgaatgtgaagacccaagccaggaa
accattaccttcctctataaatttactaaaggtgcttgtcctaaaagctatggcttcaat
gcagcaaggcttgcctgtcttcctgaagagattattcagaaaggccataggaaagcaaaa
gaatttgagaagatgacccaatcattgagactatttcgggaagtttgtctggctcttgaa
aattcagctgcagatatccaggctattcacaagttgttgactttgatcaaggaaatataa

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