Antechinus flavipes (yellow-footed antechinus): 127549073
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Entry
127549073 CDS
T08818
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04014
Ras signaling pathway
afz04015
Rap1 signaling pathway
afz04020
Calcium signaling pathway
afz04024
cAMP signaling pathway
afz04080
Neuroactive ligand-receptor interaction
afz04713
Circadian entrainment
afz04720
Long-term potentiation
afz04724
Glutamatergic synapse
afz05010
Alzheimer disease
afz05014
Amyotrophic lateral sclerosis
afz05016
Huntington disease
afz05017
Spinocerebellar ataxia
afz05020
Prion disease
afz05022
Pathways of neurodegeneration - multiple diseases
afz05030
Cocaine addiction
afz05031
Amphetamine addiction
afz05033
Nicotine addiction
afz05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
127549073
04015 Rap1 signaling pathway
127549073
04020 Calcium signaling pathway
127549073
04024 cAMP signaling pathway
127549073
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127549073
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
127549073
04720 Long-term potentiation
127549073
09159 Environmental adaptation
04713 Circadian entrainment
127549073
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
127549073
05014 Amyotrophic lateral sclerosis
127549073
05016 Huntington disease
127549073
05017 Spinocerebellar ataxia
127549073
05020 Prion disease
127549073
05022 Pathways of neurodegeneration - multiple diseases
127549073
09165 Substance dependence
05030 Cocaine addiction
127549073
05031 Amphetamine addiction
127549073
05033 Nicotine addiction
127549073
05034 Alcoholism
127549073
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afz04040
]
127549073
Ion channels [BR:
afz04040
]
Ligand-gated channels
Glutamate (ionotropic)
127549073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
127549073
NCBI-ProteinID:
XP_051832825
LinkDB
All DBs
Position
2:258832539..258871374
Genome browser
AA seq
959 aa
AA seq
DB search
MSTMRLLLLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSNVWFEMMRVYSWNHIILIVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFEPGTKNVTALLKEAQELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIFNGSHVLPNDRKIIWPGGETEKPEGYEMSTRLK
IVTIHQEPFVYVKPALDGETCNEDLTINGEKIKKVTCTGPNDTHPGANRHTILQCCYGFC
IDLLIDLAKTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTSTGGGRGALQNQKDTVLPRRAIEREEGQLQMCARHRES
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgatgcgtctactgttgcttgccctgctcttctcttgttccttcgcccgcgct
gcctgcgaccccaagatcgttaacattggcgcagttctgagcacccgaaaacatgaacag
atgtttcgcgaggctgtgaaccaggccaacaaacggcatggatcctggaagatacagctc
aatgctacctcggttacccacaagcccaatgccatccagatggccttgtctgtgtgtgaa
gacctcatctccagccaggtctacgcaatcttagttagtcacccacctacccccaacgac
cacttcactccaacccccgtctcctacacagccggcttctaccgcatccccgtcctgggg
ctcaccacccgcatgtccatctactctgacaagagcatccacttgagcttcctccggact
gtgcctccatactcccaccaatcaaatgtctggtttgaaatgatgcgtgtctacagctgg
aaccacatcatcctcattgtcagcgacgaccacgagggccgggcagcccaaaaacgccta
gaaacccttctggaggaacgggagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggcagagaaggtgctgcagtttgaacct
gggactaagaatgtgacagcgttattgaaagaagcgcaagagctggaggcccgagtcatc
atcctctcagccagcgaggatgatgctgctactgtgtaccgggcagccgcaatgctgaac
atgacaggctctgggtacgtgtggcttgtaggcgagcgggagatctcagggaatgctctc
cgctacgcccctgatggtattattggtctccagctgataaatggaaagaatgaatctgca
catatcagtgatgctgtgggtgtagtagcccaagctgtacatgagctttttgaaaaagag
aatatcactgatcccccccgtggctgtgttggcaataccaacatctggaagactggtccc
ctctttaaaagggtgctgatgtcttctaagtactcagaaggtgtgactggccgagtggaa
ttcaatgaagatggggacaggaagtttgccaattacagcatcatgaacctgcagaaccga
aaattggtgcaagtagggattttcaatggaagccatgttctacccaatgaccgaaagatc
atttggccagggggggagactgagaagccagaaggatatgaaatgtcaaccagattaaag
attgtcactatccaccaggaaccctttgtgtatgtgaaaccagctctagatggcgaaacc
tgtaatgaagatctcacaatcaatggggagaagataaaaaaggtcacttgcacaggccca
aatgacacccatccaggcgccaaccgccacactatactccagtgctgctatggtttctgc
attgacctgctcatcgacctagccaaaacaatgaacttcacctatgaggtccatctggtg
gctgatggcaagtttggcactcaggagcgggtgaacaatagcaacaaaaaggagtggaat
gggatgatgggggagctactgagtggacaggcggacatgattgtggccccactgaccatc
aacaacgagcgggcccagtacattgagttctccaagcccttcaaataccagggactgacc
atcctggtgaagaaggaaatccctaggagtacactggactcattcatgcagcccttccag
agcacattgtggctgctggttggactctctgtacatgtagtggcggttatgctctacctg
ctggaccggtttagcccctttggccggttcaaagtcaacagtgaagaagaagaagaagat
gcactgaccctctcctcagctatgtggttctcctggggggtcctgctcaactctgggatt
ggagaaggtgccccccgaagtttctcagcccgaatcctgggcatggtttgggctggcttt
gccatgatcatcgttgcctcttacactgccaacctggcagccttcctggtgttggaccgt
ccagaagagcgtatcacgggcatcaatgaccctcgactacggaacccctcagacaagttc
atctatgccacggtgaaacagagctctgtggacatctacttccggcggcaggtagagctg
agcactatgtaccggcacatggagaaacacaactatgagagtgctgcagaagccatccag
gctgtgcgggacaacaagctccacgccttcatctgggattctgccgtgctggagtttgaa
gcctcacagaagtgtgacctggtgaccacaggagaactcttcttccgctctggcttcggc
attggaatgcgcaaagacagcccctggaagcagaatgtctccctggccatcctcaagtcc
cacgagaacggcttcatggaggatttagacaagacttgggttcgataccaggagtgcgac
tcccgcagcaatgctccagctactctcaccttcgaaaacatggctggagtatttatgttg
gtggccggtgggatcgtggccggaatcttcctgattttcattgagatcgcttacaagaga
cacaaagatgcccgcaggaagcagatgcagttggcctttgcagcggtgaatgtgtggagg
aaaaacctacaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccaca
tttagggccatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagac
acgagcaccgggggtggacgcggcgctttgcaaaaccaaaaagacacggtgctgccgcga
agagctattgagagggaggagggacagctccagatgtgtgcccgccatagggagagctga
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integrated database retrieval system
