Antechinus flavipes (yellow-footed antechinus): 127558878
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Entry
127558878 CDS
T08818
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04721
Synaptic vesicle cycle
afz04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
127558878
04721 Synaptic vesicle cycle
127558878
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afz02000
]
127558878
Transporters [BR:
afz02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127558878
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
127558878
NCBI-ProteinID:
XP_051848201
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Position
4:28701808..28756338
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AA seq
630 aa
AA seq
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METTPLDSKKGQSACKDGEDCQENGILQKGLTGPGDKAEAGQISNGYSAVQSSREEGDAQ
NSNAADNTALDTEVHPGERETWTKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWKKICPIFKGIGFAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCENPWNTDNCTNYFSEGNITWTSHSISPAEEFYTRHVLQIH
KSQGLDDVGGISWQLALCIMLIFTIVYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSIVNCMTSFMSGFVIFTVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPAA
TFFAIIFFLMIITLGLDSTFAGLEGVITAVLDEFPHFWAKRREWFVLAVVITCFFGSLST
LTFGGAYVVKLLEEYATGPAVLTVVFLEAIAVSWFYGINQFCSDVKEMLGFSPGWFWRIC
WVAISPIFLLFIICSFLSSPPELRLFNYNYPRWTVLLGYCIGTSSFICIPTYITYRLIVT
PGTFKERVLKSITPETPTEIPFGDLRLNTV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaccccgctggattctaaaaaagggcagtcagcctgcaaggatggagaagac
tgccaggaaaatggcattctacagaagggactgactggtccaggagacaaggcagaagca
ggacaaatctcaaatgggtactcagccgttcagagctccagggaggaaggggacgcccag
aactccaacgcagctgacaacaccgccctagacactgaagtccacccaggggagcgagag
acctggaccaaaaagatggacttcctcctctcagtcatcggctatgctgtggacctcggc
aacgtgtggcgcttcccatatatatgctatcaaaatggaggaggggccttccttatcccc
tacaccatcatggccatttttggtgggattcctctgttctacatggagctggctctgggc
caatatcatcgaaatggctgcatttcaatatggaagaaaatttgccccattttcaaaggg
atcggcttcgccatttgcatcatcgccttttacatcgcctcctactataacaccatcatg
gcctgggctctctactacctcatctcttcctttacggatcaactgccctggaccagctgt
gagaacccctggaacaccgacaattgcaccaactacttttcggaaggcaacatcacctgg
acttcccactccatatcacctgctgaagaattttatacgcgccatgtcttacagatccac
aagtctcaaggactagatgacgtggggggcattagctggcaactggctctctgtataatg
ttgatcttcactattgtctactttagcatctggaaaggggtcaaaacatctggcaaggtg
gtgtgggtaacggctactttcccttatatcatcctgtccatcctgcttgtaaggggggcc
acactgccaggagcttggaggggtgtccttttctacctgaaacccaattggcagaagctc
cttgaaactggggtctgggtggatgcggcggctcagattttcttctcgttgggtcctggc
tttggtgtcttactagcctttgctagctacaacaaattcaacaacaactgttatcaagat
gccctggtgactagcattgtaaattgcatgacgagcttcatgtctggatttgtgatcttc
actgtgctcggttacatggcggagatgaggaatgaagacgtgtccgaggtggctaaagat
acagggcccagtctccttttcatcacctacgcggaggccatcgccaacatgccagccgcc
accttcttcgccatcattttcttcttaatgataatcactctgggcttagacagcacgttc
gcaggacttgagggcgtgatcaccgcggtgctggatgaattcccccatttctgggccaaa
cgccgggagtggttcgtgcttgctgtggtcatcacctgtttctttggatctctgtccacc
ttgacttttggaggggcctatgtggtaaagttgctggaagaatatgccaccggaccagct
gttctcactgtggtgtttttagaagcgatcgccgtgtcttggttctatggtatcaaccag
ttctgcagcgacgtgaaagaaatgcttggttttagccccggttggttctggaggatctgc
tgggtagcgatcagcccaatatttctgctgttcatcatctgcagttttctgagcagcccc
ccagaactgcggctcttcaattacaattaccctcgctggactgtccttctgggctactgc
atcgggacttcttccttcatctgcattcccacctatatcacttatcggttgatcgtcact
ccagggacattcaaagagcgtgttcttaaaagtatcactccagaaacacctacagagatt
cccttcggagaccttcgcttgaatactgtgtag
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