Antechinus flavipes (yellow-footed antechinus): 127559641
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Entry
127559641 CDS
T08818
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz00900
Terpenoid backbone biosynthesis
afz01100
Metabolic pathways
Module
afz_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
127559641
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
afz01006
]
127559641
Enzymes [BR:
afz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
127559641
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
127559641
2.5.1.29 geranylgeranyl diphosphate synthase
127559641
Prenyltransferases [BR:
afz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
127559641
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
127559641
NCBI-ProteinID:
XP_051849536
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All DBs
Position
4:complement(95928425..95971271)
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AA seq
299 aa
AA seq
DB search
MEEAQKTSERILLEPYRYLLQLPGKQVRTKLSQAFNHWLKVPEDKTQIIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQLL
ELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSSYKEDLKPLLNTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
IDIKKYCVHYLENVGSFEYTRNTLRELESEAYKQIEALGGNPELVALIKHLSKMFKEEN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctcagaaaacatctgaaagaatacttttagaaccttacaggtacttactt
caactaccaggtaaacaagtgagaactaaactttcacaagcatttaatcactggctcaaa
gttcctgaagataagacacagattatcattgaagttacagagatgttacataatgccagt
ttacttattgatgatattgaagacaactcaaaattgagacgtggctttcctgttgctcat
agcatatatggaattccatctgtaatcaattctgccaattatgtgtatttccttggtcta
gagaaagtcttaactctcaatcacccagatgcagtaaagctttttacccgccaactccta
gaacttcatcagggacaaggcttagatatttactggcgggataattacacatgtcctact
gaagaagaatataaagctatggtgttgcagaagacaggtggactatttggattagcagta
ggtcttatgcaattgttttccagctataaagaagatttaaagccactccttaatacactt
ggtctctttttccaaattagggatgattatgctaatctacactccaaagaatatagtgag
aacaaaagtttttgtgaagatctaacagagggcaagttttcatttcctactattcatgct
atttggagtagacctgaaagtactcaggttcaaaatatcttgcggcagaggacggaaaac
atagatattaaaaaatactgtgtacattatcttgagaatgtaggttcatttgaatatact
cgtaatacacttagggagcttgaatctgaagcctataaacaaattgaagctcttggtgga
aatcctgaattagtagctctaataaaacatttaagtaagatgttcaaagaagaaaattga
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