Antechinus flavipes (yellow-footed antechinus): 127562793
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Entry
127562793 CDS
T08818
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03013
Nucleocytoplasmic transport
afz05014
Amyotrophic lateral sclerosis
afz05200
Pathways in cancer
afz05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127562793
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127562793
09162 Cancer: specific types
05216 Thyroid cancer
127562793
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127562793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127562793
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127562793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Intein_splicing
Ntox1
Motif
Other DBs
NCBI-GeneID:
127562793
NCBI-ProteinID:
XP_051854726
LinkDB
All DBs
Position
4:408352636..408423580
Genome browser
AA seq
2373 aa
AA seq
DB search
MAAVLQQVLERQELTKLPKPVQAKLEKFLADQQSEIDCLKGRHEKFKVESEQQYFEVEKR
LSQSQERLVNESRECQILRQELEKLNQQLKSVTEKNKELETAQDRHVAIQSQLTRAKEEL
EAEKRDLVRTSERRSQELEYLTEDVKRLNEKLKESNTSKGELQLKLDELQASDVSVKYRE
KRLEQEKELLYNQNTWLNTELKTKTDELLAVGREKGNEILELKCNLENKKEEVSRMEEQV
NGLKTSNDHLQKHVEDLLTKLKEAKEQQANMEEKFHNELNAHIKLSNLYKSAADDSEAKS
NELTGAVDELHKLLKEAGEANKGMQDHLMEVEESKAQMEKEMLEKIGKLERELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRIN
KYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKHSS
VLERDNQRMEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLVALRELGETREREEQETTSSRITELQLQLESALTELEQLRESRHHQ
MQLVDSIVRQRDMYRILLSQTTGVVIPLQASSLEEISLMSTPKHSSGVSQTISTPAPVST
VESTEAIEAKAALKQLQEIFENYKKEKVENDKIQNEQVEKLQEQVTDLRSQNTKISTQLD
FASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEV
RAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLNN
QIEKLEREISQLKKKLENEVEQRHTLTRNQDVHLLDTKRQLETEINRHLNTKELLKNAQK
EAATLKQQLNNVEAQLASQSAQRAPGKGQPNTKEDIDDLISQLRQAEEQINDLKERLKTT
SSNVEQYRAMVLSLEESLNKEKQVTEEVRKNIEARLKDSAEYQAQLEKKLMEAEKEKQEL
QDEKRRALESMEHQLSELKKTLSNVQNEVQEALQRASTALSNEQQARRDCQEQAKIAIEA
QNKYERELMLHAADVEALQAAKEQVSKNLLVRQQLEETAQKAESQLLECKASWEERERML
KDEAAKCVSRCEDLEKQNTLLHDQIEKLSDKVVTSMKEGVQGSLNVSLNEEGKSQEQILE
ILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQ
HEELMKKTETMNVVIETNKMLREEKERLEQELQQMQAKVRKLELDILPLQESNAELSEKS
GMLQAEKKLLEEDIKRWKARNQHLASQQKEPDLEECRKLLSEKEVNTKRIQQLTEETGRL
KAEIARSNASLTTSQNLIQNLREELNKMRTEKETLQKDLEAKVADIQEKVKTITQVKKIG
RRYKTQYEELKAQHDKVMETSQSSGELLEQQVSVHEVQELKENLNQAEIKTKSLENQIEN
LQKTVSEKEAEARSLQEQITQLQSELSRLHQDLQDRTTQEEQLRQHMTEKEDKTRKALVA
AKAKLAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELRE
QQERHLEQRDEPQETTSKVPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPS
KVTAAAIAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVDHVP
VFGSTSGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEPASQELSPSIVE
VVQSSPIERPSTSTSVFGTVSATPSSSLPKRAREEEDDNTTETSEQVSDETIDMPLSKKL
KSIPPVGPEEEVTAEESTDGEVEPLVNQDSQDSIGEGVTQGDYTPMEDSEETSQSLHIDL
GPLQSDQQTSISCQDAQSKGDDVIVIDSDDEDDDDDENDGEQEDYEEDDEDDDDDDDEDT
GMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESTGGEISQRAADSQNGGEG
TSLTESSLPHENSREQQPSSASERQGPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRI
QMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGV
PRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAP
VTVFTESTTADASEHASQSVPMVTTSTGSLSTTAETGTGDDGDEVFVETEPEGISSEAGL
EIDSQQEEEPVQASDESDLPSTSQDPPSSSSADTSSSQPKPFRRVRLQPQTLRTGVRGRQ
FNRQRGKILLSENMVGMRAEVIPMNQNKCPKPE
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgctgcagcaggtcctggagcggcaggagctgaccaaactgcccaagccc
gtccaggccaaattggagaagttcctggcggaccagcagagcgaaatcgactgcctgaag
gggcgacacgaaaagttcaaggtggaaagcgagcaacaatactttgaggtagagaagcgg
ctgtcccagtctcaagagagacttgtaaatgaaagccgagaatgccaaatattgcgtcaa
gaactggaaaaacttaatcaacaattgaagtcagtgactgagaaaaacaaagaattggaa
actgctcaagatcgacatgttgctattcagagtcaacttacaagagcaaaggaggaatta
gaagctgagaaaagagatttggtcagaaccagtgaaagacgttcacaagaacttgaatat
ttaactgaggatgttaagcgcctaaatgaaaaactcaaggaaagcaatacctcaaaagga
gagctacagttaaaattagatgaacttcaagcatctgatgtttctgttaagtatcgagag
aaacgtttggaacaagaaaaggaattattatataatcagaacacatggctgaatacagag
ctaaaaaccaaaacggatgaacttctggctgttggtagagaaaaaggaaatgaaatcctg
gaacttaaatgtaatcttgaaaacaaaaaagaagaggtttccaggatggaggaacaagtg
aatggcttgaaaacatcaaatgaccatctacaaaaacatgttgaagaccttctgaccaaa
ttgaaagaggccaaggagcagcaggccaatatggaagaaaaatttcacaatgagctaaat
gcacacataaaactctctaatttgtataagagtgctgctgatgattctgaagcaaaaagc
aatgagctaactggagcagtggatgagcttcacaagcttttaaaagaagctggagaagct
aacaagggaatgcaagaccatttaatggaagtggaagaatcaaaagcccaaatggaaaaa
gaaatgctagagaaaattggcaaattagagagagaactagagaatgctaatgatctactt
tcagccacaaaacggaaaggggccatattatctgaagaggaactcgcagctatgtctcct
actgcagcagctgtggctaaaatagtgaaacctggaatgaaattaactgagctatacaat
gcatatgtagaaacacaagatcaactgctcctagagaagctggagaataagagaattaat
aaatatctagatgaaatagtaaaagaagttgaagcaaaagcaccaattttaaaacgccaa
cgtgaggaatatgaacgtgcccaaaaggctgtggcaagtttatctgttaagcttgagcaa
gcaatgaaggaaatacagcgattgcaagaagacactgataaagccaacaaacattcatct
gtacttgaaagggacaaccaaagaatggaaatacaagtgaaagatctatcacaacagatt
agagttcttttgatggaacttgaagaagcaaggggtaatcatgtaattcgtgatgaagaa
gtaagttctgctgacatcagtagttcatctgaagttatatcacagcatctagtctcctac
agaaatattgaagaacttcagcaacagaatcagcgccttttagtagcccttagggagctt
ggagagacaagagaaagagaagaacaagaaacaacttcttcaagaattactgaacttcaa
cttcaacttgagagtgccctcactgaattggaacaacttcgtgaatcccgacaccatcag
atgcaacttgttgattcaatagtccgtcagcgtgacatgtatcgtattttgttgtcacag
acaactggagttgttattccattgcaagcgtcaagcttagaggagatttccctgatgtcc
acaccaaagcattcttcaggtgtgtcacagaccatctccactcctgctccagtttccaca
gttgagtcaacagaggcaatagaggccaaggctgcacttaagcagttgcaggaaattttt
gaaaactacaaaaaagaaaaggtagaaaatgataaaattcaaaacgaacaagttgagaaa
cttcaggagcaagttacagatttacggtcacagaataccaagatttctactcagctagat
tttgcttctaaacgctatgaaatgctacaagacaatgtcgagggataccgtcgagaaatt
acgtctttacatgagagaaatcaaaaactcactgcaaccactcaaaagcaggagcagatc
atcaatacaatgactcaagatctaagaggagcaaatgagaagttggcagttgcagaagta
agagcagaaaatttgaaaaaggaaaaggaaatgttgaaattgtcagaagttcgcctctcg
caacagagagaatctttgttagctgaacaaagaggacaaaacttattactaactaacctg
caaacaattcagggaatactggagagatctgaaacagaaaccaagcagagacttaataat
cagatagaaaaacttgaacgtgaaatatctcagctgaagaagaaattagaaaatgaagta
gaacaaagacacacacttacaagaaatcaggatgttcatcttttagatacaaagagacag
ctagagacggaaataaaccgtcaccttaatacaaaagaattactaaaaaatgctcaaaag
gaagctgctacattgaaacaacaactcaataatgttgaagcccagcttgcttcccagtca
gcacagagagctcctggaaaaggtcagcctaatactaaagaagacatagatgatcttatc
agtcaactgaggcaagccgaagaacagattaatgatctgaaggaaagactcaagacaaca
tctagtaatgtagaacagtatcgagctatggttcttagcttagaagaatccctaaataag
gaaaaacaagtgacagaagaggtacgtaaaaatattgaagcccgtttaaaagactcagct
gagtatcaggcacaactggaaaaaaaattaatggaagcagagaaggaaaaacaagaactt
caagatgaaaagcgcagagctcttgaaagcatggagcatcagctatctgaattaaagaag
actctctctaatgttcaaaatgaagttcaagaagctcttcagagagcaagcacagctttg
agtaatgagcagcaagccagacgtgattgtcaggaacaagctaaaatagcaatagaggct
cagaataaatatgaacgggaactgatgctacatgctgctgatgtggaagctttgcaggct
gctaaagaacaagtctctaaaaatttactagtgcgtcagcagttggaagaaacagcgcag
aaagcagaatcacagttgttggaatgcaaagcctcttgggaggaaagagagagaatgtta
aaggatgaagctgccaaatgtgtatctcgctgtgaagacttagagaaacaaaatacatta
cttcatgatcagattgaaaaattaagtgacaaggttgtgacttctatgaaagaaggtgtg
caaggttcattaaatgtttctctgaatgaagaaggcaagtctcaagaacaaatcttagaa
attctcaggtttatacggcgagaaaaagaaattgcagaaaccagatttgaagtagcccag
gtagaaagtttgcgttacagacaacgggtagagctcctagaaagagagcttcaggagctg
caggatagtctaaatgctgagagggagaaagtccaggtaactgcaaaaacaatggctcag
catgaagaactgatgaaaaaaactgaaacaatgaatgtagttatagaaaccaacaaaatg
ctgagggaagaaaaagaaaggctggaacaagaactacaacagatgcaagcaaaggtcagg
aaactggagttagatatcttaccattacaagaatcaaatgctgaactgagtgagaaaagt
ggtatgttgcaagcagaaaagaagttgctagaagaagatatcaaacgctggaaagcacga
aaccagcatcttgcaagccagcaaaaagagccagatttggaagaatgtcgtaagctcctt
tcagagaaggaagtaaatactaaacgtattcaacagttgactgaagaaactggaagactt
aaagcagaaattgcaaggtcaaatgcatctttgaccactagccaaaatttaattcagaac
ctaagggaagaattaaataaaatgagaactgaaaaggaaactctccaaaaggacttagaa
gccaaagtagctgatatacaagaaaaagtcaaaactattactcaagtcaagaaaattgga
agaagatataagactcaatatgaagaacttaaagcacaacatgataaggtaatggagact
tctcagtcttctggagaattactggaacaacaagtatctgtccatgaagtgcaagagctc
aaagaaaatctgaatcaagctgaaataaaaacgaaatctctagaaaaccaaatcgaaaac
cttcagaagacagtatctgaaaaagaggcagaagctagaagtcttcaggagcagataaca
caacttcagtctgaactgtcacgtcttcatcaagatctccaagacagaactacacaggag
gagcagctgcgacaacatatgactgaaaaggaagacaaaacaagaaaggctcttgttgca
gccaaagcaaagctggcacatttagctggtgtcaaagatcaactaactaaagaaaacgaa
gagcttaaacaaagaaatggtgcattagatcaacagaaggatgagctggatgtccgtatg
actgctcttaaatcacagtatgaaggtcgaattagccgcttggaacgagaactcagagaa
cagcaagaaagacatcttgagcaaagagatgaacctcaggaaaccactagcaaggtccct
gaacaacaaagacagatcaccctcaaaacaactccagcttcaggtgaaagaggaattgct
agtacatcagatccaccaacagccaacatcaagccaactcctgttgtatctactccaagc
aaagtgacagctgctgccatagctgggaataagtcaacaccaagagctagtatccgacct
atggttacacctgcaacagttacaaatccaaccactactccaacagctacagtgatgccc
acaacacaggtggaatctcaggaagctatgcagtcagaaggacctgtggatcatgttcca
gtttttggaagcacaagtgggtctgtacgttctaccagtcccaacgtccaaccctctatt
tctcaacctattttaactgttcagcaacaaacacaggctacagcctttgtgcagcccact
caacaaagtcatcctcaaattgagcctgctagccaagaactttccccaagcattgtagaa
gttgtacagagttcaccaattgaaagaccttccacttcaacatcagtgtttggtacagtt
tcagctactccaagttcatctttgcctaaacgtgcacgtgaagaggaagatgataacacc
acagagacatcagaacaagtctctgatgaaacaatagatatgcctctctcaaagaaattg
aagagcatacctcctgtaggacctgaggaagaagttacagcagaagagagcactgatgga
gaggtcgagccccttgtaaatcaggattcacaagattctattggagaaggagtcactcag
ggagattatacacctatggaagacagtgaagaaacttctcaatcccttcacatagatctt
ggacccctacagtcagatcaacagacttcaatctcttgccaggatgcccaatccaaagga
gatgatgtcattgtgatagacagtgatgatgaagatgatgatgatgatgaaaatgatggt
gaacaagaggactatgaggaggatgatgaggatgacgatgatgatgatgatgaagataca
ggaatgggagatgaaggtgaagatagtaatgaaggcactggtagcgcagatggcaatgat
ggctatgaagctgatgatgctgagggtggtgatggtactgatccaggtactgaaacagaa
gaaagtacaggaggtgaaattagccagagagcagcagattctcaaaatggtggtgaagga
acttctcttacagaatcatctttgccccatgagaattctagagaacaacaaccatcatca
gcatctgaaagacagggtcctcgggcacctcagtcacctcgaagaccacctcatccactt
cccccacgactaactatccatgcacctcctcaggagttgggaccaccagtccagagaatt
caaatgacacgaagacagtcagttggacgaggacttcagctaactcctggcataggtggc
atgcagcagcacttttttgatgatgaggaccgaactgtgccaagtacaccaactcttgtg
gtaccacatcgtacagatggatttgcagaagcaattcattcgccccaggttgctggtgtt
cccagattccgatttggaccccctgaagatatgccacaaacaagttctagccattcagat
cttggtcagcttgcatctcaaggaggtttaggtatgtatgaaacacccctcttcttagca
catgaagaagaatctggtggccgaagtgttcctactactcctctacaagttgcagctcca
gtgactgtatttactgaaagtactactgctgatgcttctgagcatgcatctcagtctgtt
ccaatggtgacaacatccaccggcagtttgtctacgactgcagaaacagggacaggtgat
gatggagacgaagtatttgtggagacagaacctgaaggaattagttcagaagctggccta
gaaattgatagccagcaggaggaagaacctgttcaggcatctgatgagtctgatcttcct
tctactagccaagatcctccgtccagttcctctgcagatactagcagtagtcaacctaag
cctttcagacgagttaggcttcagccacagactttaagaacaggagtccggggtcgtcag
tttaaccgacaaagaggtaagattctcttgtctgagaacatggttgggatgagggcagaa
gtaattcctatgaatcagaacaagtgtcctaaacctgagtaa
DBGET
integrated database retrieval system
