Agathobaculum sp. NTUH-O15-33: RWV98_00740
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Entry
RWV98_00740 CDS
T09495
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agat03009
]
RWV98_00740 (rimO)
Enzymes [BR:
agat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RWV98_00740 (rimO)
Ribosome biogenesis [BR:
agat03009
]
Prokaryotic type
ribosomal protein modification factors
RWV98_00740 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NAGidase
Motif
Other DBs
NCBI-ProteinID:
WNX84830
LinkDB
All DBs
Position
complement(137188..138525)
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AA seq
445 aa
AA seq
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MAKIGLISLGCAKNLVDSEHMLSLLRRAGHTIVEDMNEAEVGIVNTCGFIEAAKTEAIET
ILETASHKQTGPMRGLVVTGCLAQRYPDEIRDELPEVDAICGTGSYESITDAVAAALGGK
KAAYMADMAAAALDGGRERLTPSYTAYLKIAEGCSNRCAYCIIPKLRGPYRSRDMASLLD
EAKQLADAGVKELIVIAQDITKYGLDLPERRRLLPDLLRALCGMDFTWVRLHYLYPDQIT
DELIDVIAEEDKIVKYLDIPLQHVSPRILRAMHRPGNREEFVSLIENLRARIPGLTLRTS
LIVGLPGETEEEFAELCEFLQQTGIERVGVFEFSPEEGTEAATLPDQIDAETKQRRRLIV
EELESGVLDDYNISRHNTEMQVLCEGFDDEQQLYFGRTYADSVEVDGKVWFSSEDEIEAG
AFVTVLITDSLGPDLLGVRGEEKTQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcggactgatctcgctcggctgcgccaaaaatttggtggacagcgagcac
atgctttccctgctgcgcagggccgggcacaccatcgttgaggatatgaacgaggccgag
gtgggcatcgtcaacacctgcggctttatcgaagccgcaaagaccgaagcgatcgagacc
attcttgagaccgcgtcgcacaagcagaccgggccgatgcgcggccttgtggtaacgggc
tgcttggcgcagcgctacccggacgagatacgcgacgagctacccgaggtggacgcgatc
tgcggcaccggcagctacgaaagcattacggacgcggtcgccgccgcgcttggcggcaaa
aaagccgcctacatggccgatatggccgccgccgcgctggacggcgggcgcgaacggctc
acgccctcctacacggcctatcttaagatagcggagggctgctccaaccgctgcgcctac
tgcatcatcccgaagctgcgcgggccctaccgttcgcgcgatatggcgtcgctattggac
gaagcaaagcagcttgccgacgcgggcgtaaaagaactgatcgtcatcgcgcaggacatt
accaagtacgggcttgacctgcccgagcgccgccgcctgctacccgacctgctgcgcgcg
ctttgcgggatggattttacttgggtgcgcctgcactacctctaccccgaccagatcacg
gacgaattgatcgacgtgatcgcggaggaggacaaaattgtaaaatatttggatatcccc
ctacagcatgtgtcgccgcgcattttgcgcgccatgcaccggccgggcaaccgcgaggaa
ttcgtttcgctgattgaaaatctgcgtgcgcgcattccgggccttacactgcgcaccagc
ctgatcgtcggcctgcccggcgaaaccgaggaggaatttgccgagctgtgcgagtttttg
cagcagaccggcatcgagcgcgtgggcgtgttcgagttttcgcccgaggaaggcaccgaa
gccgccaccctgcccgatcagattgacgcggagaccaagcagcgccgccgcctgatcgtg
gaggagctggaatccggcgtgctggatgattacaatatttcgcgccacaatactgaaatg
caggtgctgtgtgagggcttcgacgacgagcagcagctttattttggccgcacctatgcc
gattcggtcgaggtggacggcaaggtatggttttcgagcgaggacgaaatagaagccggg
gcgttcgtcaccgtgcttattaccgacagcctagggcctgatctgctcggcgtgcggggg
gaggaaaaaacgcaatga
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