Agathobaculum sp. NTUH-O15-33: RWV98_07600
Help
Entry
RWV98_07600 CDS
T09495
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Pathway
agat00860
Porphyrin metabolism
agat01100
Metabolic pathways
agat01110
Biosynthesis of secondary metabolites
agat01120
Microbial metabolism in diverse environments
agat01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RWV98_07600 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agat04147
]
RWV98_07600 (hemB)
Enzymes [BR:
agat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
RWV98_07600 (hemB)
Exosome [BR:
agat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RWV98_07600 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
PEP_hydrolase
Motif
Other DBs
NCBI-ProteinID:
WNX86128
LinkDB
All DBs
Position
1468014..1469000
Genome browser
AA seq
328 aa
AA seq
DB search
MFNDTIRPRRLRASDSLRRMARETRLSPDSLIWPIFVREGTHIYEEIPSLPGQYHYSPDE
LGRAVERARAHGVSRLILFGLPEEKDEIGSGAWAENGIVQQGLRALRALDPSLYLITDVC
MCEYTSHGHCGILCGHDVDNDQTTERLAQIAVSHVRAGADMVAPSDMMDGRVAAIRRALD
ENGFVNTPIMSYAAKYASFFYGPFRDAAGSAPSFGDRRSYQMDWHNGREAMRECALDVQE
GADILMIKPAMSYLDLVYQCKQRFELPVAAYSVSGEYAMIKAAAKAGLIDEYGVMCESAV
GMFRAGADILITYFAPELADAMRKGDIG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgatacgatccgcccgcgccgcctgcgcgcttcggacagcctgcggcgcatg
gcgcgcgaaacgcgcctgtcgccggacagcctgatctggcccatcttcgtgcgcgaaggc
acgcatatctatgaggagatcccctcgctgcccggccagtatcactattcgccggacgaa
ttggggcgcgcggtcgagcgagcgcgcgcgcacggcgtttctcgcctgatcctgttcggc
ctgcccgaagagaaggacgagatcggttcgggcgcgtgggccgaaaacgggattgtgcag
cagggcctgcgcgcactgcgcgcgctcgatccctcgctctacctcatcaccgatgtgtgc
atgtgcgaatacacctcgcacggccactgcggcatcctgtgcgggcacgacgtggacaac
gatcaaacgaccgagcggctggcgcagatcgcggtcagccatgtgcgggcgggcgcggac
atggtcgccccctcggatatgatggacggccgcgtggccgccatccgccgcgcgctcgat
gaaaacggctttgtaaacacgcccatcatgtcctacgcggccaagtacgcttcgtttttc
tacggcccgttccgcgacgcggcgggctcggccccgtcctttggcgaccgccgctcctac
caaatggactggcacaatggccgcgaggctatgcgcgagtgcgcgctcgacgtgcaggag
ggcgcggatatcctgatgatcaagcccgccatgtcctatctcgatctggtctatcagtgc
aaacagcggtttgaactgccggtcgcggcctattcggtatcgggcgagtacgccatgatc
aaggcggcggcaaaggccggtctcatcgacgagtacggcgtgatgtgcgaatcggccgtc
ggcatgttccgcgcgggcgcggatattttgatcacttactttgctcccgaactggcggac
gcgatgcggaaaggggatatcggctga
DBGET
integrated database retrieval system
