Accipiter gentilis (Northern goshawk): 126034667
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Entry
126034667 CDS
T08649
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
agen
Accipiter gentilis (Northern goshawk)
Pathway
agen03020
RNA polymerase
agen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126034667
09124 Replication and repair
03420 Nucleotide excision repair
126034667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agen03021
]
126034667
03400 DNA repair and recombination proteins [BR:
agen03400
]
126034667
Enzymes [BR:
agen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126034667
Transcription machinery [BR:
agen03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126034667
DNA repair and recombination proteins [BR:
agen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126034667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
126034667
NCBI-ProteinID:
XP_049648580
LinkDB
All DBs
Position
35:9967133..9992336
Genome browser
AA seq
1969 aa
AA seq
DB search
MHGGPPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPR
QGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKILRCVCFFCSKLLVDS
NNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDHKFGVEQPEGDEDLTKEKGH
GGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMDPK
FARPEWMVCTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAH
VIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDF
SARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIR
DNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWST
FRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDT
LTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHIN
CIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEMG
HDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAH
NNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINI
SQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAM
GGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESV
EFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEELVKDILSNAHIQNELEREFEKMRE
DREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLV
IVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIA
HPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTV
FLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQGTVVAEDQEWVNVYYEMPD
FDVSRISPWLLRIELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRI
MNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKII
ITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERE
LYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLME
AAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSALPGLGVGGPTGM
FFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGY
SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS
YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTS
PSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYS
PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP
KYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEDN
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtgggccgccttcgggcgacagcgcttgcccgttacgcaccatcaaacgagtc
cagttcggcatcctcagccccgatgagatgaaacggatgtcggtgactgaggggggcatc
aagtaccccgaaacgacggagggggggcgccccaaactcggggggctcatggacccccgt
cagggtgtcattgagaggacggggcgctgccagacctgtgctggtaacatgacagagtgc
ccaggccactttggtcacatcgagctggccaagcctgttttccacgtgggctttttgggc
aagaccatgaagatcctgcgttgtgtttgcttcttctgttccaaactgctggtggactcg
aacaaccccaaaatcaaggatattttggggaaatcgaaggggcaacccaagaagcggctg
acgcacgtctacgacctctgcaaggggaagaacatctgcgaggggggcgaggagatggac
cacaaatttggggtggagcagcctgagggtgatgaggacctcaccaaggagaagggccac
ggagggtgcgggcgataccagccccgcatccgtcgctcgggtttggagctctatgccgag
tggaagcatgtcaatgaggattcgcaggaaaagaagatcctgctcagccccgagcgggtg
catgagatcttcaagcgcatctcagatgaggaatgtttcgttctgggcatggatcccaaa
tttgctcgccccgagtggatggtctgcaccgttctgcccgtaccccccctctccgtgcgc
cctgctgttgtcatgcagggttctgctcgtaatcaggatgatctgacccacaaactggct
gacatcgtgaagatcaacaaccagctacgccgtaacgagcagaacggggcggccgcccac
gtcattgccgaggatgtcaaactcctccagttccacgtggccaccatggtggacaacgag
ctgcccggcctgccgcgggcgatgcagaagtcggggcgtcccctgaagtccctgaagcag
cggttgaaggggaaggagggtcgggtgcgggggaacctgatggggaagcgggtggatttt
tctgcccgcaccgtcatcacccccgaccccaatctggccatcgatcaagtgggcgtcccc
cgctccatcgccgccaacatgaccttcgccgaaatcgtcacccccttcaacatcgacagg
ctgcaggagctggtgcgccggggaaacagccaataccccggggccaagtacatcatccgg
gacaacggggaccgcatcgacctgcgcttccaccccaaacccagcgacctccacctccag
atcggctacaaggtagagagacacatgtgtgatggggacatcgtcatcttcaaccgccag
cccaccctacacaagatgtccatgatgggccaccgtgtccgcatcctgccctggtccacc
ttccgcctcaatctcagcgtcaccaccccctacaatgcggatttcgatggggacgagatg
aacctccaccttccgcagtccctggagacgcgagccgagatccaggagttggccatggtc
ccccgaatgatcgtcaccccccaatccaaccgtcctgtcatgggcattgtccaggacacc
ctcaccgctgtccgcaagttcactaagcgtgatgtcttccttgagcgtggggaggtgatg
aacctgctgatgttcctctcgacatgggacgggaaggtgccccaacctgccatcttgaaa
ccccgtcccctctggacgggcaaacagatcttctccctcatcatccctggacacatcaac
tgcatccgcacccacagcacccaccccgatgacgaggacagtgggccctacaagcatatc
tcccctggggacacaaaggtggtcgtggagaatggagaactgatcatgggcatcctctgc
aagaagtcattgggcacctcagcaggttccttggtccatatttcctacctggaaatggga
cacgacactacccgcctcttctacagcaatatccaaaccgtcatcaacaactggctcctc
attgagggccacacgatcggcattggggactccatcgctgacgcaaagacctaccaggac
atccagaacaccatcaagaaagccaagcaggatgtcatagaggtcattgagaaggcccac
aacaacgagctggagcccaccccaggcaacacgctgcggcagacctttgagaaccaggtg
aaccgcatcctcaacgatgcccgtgacaagactggttcctctgcccagaagtccctctct
gagtacaacaacttcaagtccatggtggtgtcaggcgccaaaggctccaagatcaacatc
tcccaggtgatcgcagtggtggggcagcagaacgtggagggtaagcggatccccttcggc
ttcaagcaccgcacgctgccccacttcatcaaggatgattacggccctgagagccggggc
tttgtggagaactcctacctggctggcctcacccccaccgagttcttcttccacgccatg
ggtggccgtgagggtctcatcgacactgctgtcaagacggctgagaccgggtacatccag
cggcggctgatcaagtcgatggagtcggtgatggtgaagtatgacgcgacggtccgtaac
tccatcaaccaggtggtgcagctgcgctatggggaggacgggctggcgggcgagagcgtc
gagttccagaacctggccaccctcaagccctccaacaaggctttcgagaagaagttcaag
tttgattacaccaacgagcgggcgctgcggcggacgctgcaggaggagctggtcaaggac
atcctctccaacgcccacatccagaacgagctcgagcgggagttcgagaagatgcgggag
gaccgtgaggtcttgcgggtcatcttccccactggtgacagcaaggttgtgctcccctgt
aacctgctgcggatgatctggaacgcccaaaaaattttccacatcaactcgcgcctcccc
tctgacctgcaccctgtcaaggtggtggagggggtgaaggagctgagccgtaagctggtg
atcgtgaatggggacgaccccctgagccggcaggcgcaggaaaatgccacactgctcttc
aacatccacctccgctccaccctctgcagccgccgcatggtggaagagttccggctcagt
ggggaggccttcgactggctgctgggggagatcgagtccaagttcaaccaggcgatcgcc
caccctggggagatggtgggggcactggcagcccagtcactgggagagccagccacccag
atgaccctcaacaccttccactatgctggcgtctcggccaagaacgtcaccctgggtgtc
ccccgcttgaaggagctcatcaacatctccaagaagcccaagacaccctcactcaccgtc
ttcctgctgggccagagtgcccgcgatgccgagagggccaaggacatcctgtgccgcctg
gagcacaccacactgcggaaggtgacggccaacaccgccatctactacgaccccaaccct
cagggcacggtggtggctgaggaccaggagtgggtcaacgtctactacgagatgcccgac
tttgacgtcagccgcatctcaccctggctgctccgcatcgagctcgaccgcaagcacatg
actgaccgcaagcttaccatggagcaaatcgccgagaagatcaatgctggctttggggat
gacctcaactgcatcttcaacgatgacaatgcggagaagctggtgctgcggatccgcatc
atgaacagtgatgagaacaagatgcaggaggaggaggaggtggtggacaaaatggatgac
gacgtcttcttgcggtgtattgagtccaacatgctgacggacatgacgctccagggcatt
gagcagatcagcaaggtgtacatgcacctaccacagacggacaacaaaaagaagatcatc
atcacagaggacggagagttcaaggctcttcaggagtggatcctggagaccgacggcgtc
agccttatgcgggtgctgagcgagaaggacgttgaccccgtccgcaccacctccaatgac
atcgtcgagatcttcaccgtgctggggatcgaggcggtgcggaaggcgctggagcgggag
ctctaccacgtcatctcctttgacggttcctacgtcaactaccgtcacctggccctgctc
tgtgacaccatgacctcccgtgggcacctgatggccatcacccgtcacggcgtcaaccgc
caggacaccgggcccctcatgaagtgctcctttgaggagacggtggatgttctgatggag
gcagcggctcacggggagagcgaccccatgaagggggtgtcggagaacatcatgttgggt
caactggcgcccgccggcaccggctgcttcgatctcctcctcgacgctgagaaatgcaaa
cacggaatggagatccccagcgccctcccggggctgggcgtcggggggcccacagggatg
ttcttcgggtcggcccccagccccatgggcgggatgtcccctgccatgacaccgtggaac
cagggtgccacccccgcctacggggcctggtctcccagcgtaggtagcggcatgaccccg
gggggtgccggcttctcccccagcgccgcctccgatgccagcggcttcagccctggctac
tccccggcatggtcgcccacccccggctcccccggctccccggggccctccagcccctac
atcccctccccaggtggcgccatgtcacccagctacagcccgacatcacctgcctacgag
ccgcgctcacctgggggctacaccccacagagccccagttacagcccgacgtcacccagc
tacagcccaacatcgcccagctacagcccaacatcgcccaactacagcccgacatcaccc
agctacagcccaacgtcccccagctacagcccgacctcccccagctacagtccgacctcc
cccagttacagcccaacatcacccagttacagcccgacttcccccagttacagtccgacc
tctcccagttacagcccgacatcacccagttacagccccacctcgcccagttacagcccg
acgtcacccagttacagccccacctcgcccagttacagcccgacatctccgagttacagc
ccgacttcccccagctacagcccaacctctcccagttacagccctacttctcccagttac
agccccaccagccccaactacagccccaccagccccaactataccccaacttctcccagt
tacagccccacttctcccagttacagccccaccagccccaactacaccccgacctccccc
aactacagccccacctcccccagttacagccctacctcccccagttacagccccacctct
cccagttactcgccctccagcccccgctacaccccgcagtcgcccacctacacccccagc
agccccagttacagccccagcagccccagctacagccccacctcccccaagtacaccccg
accagccccagctacagccccagctcccccgagtacacccccaccagccccaagtacagc
cccacctcccccaagtacagccccaccagccccaaatacagccccacatctcccacctac
agccccaccacccccaagtacagccccacctcccccacctacagccccacctctcccgtc
tacacccccaccagccccaaatacagccccacctccccgacttacagccccaccagcccc
aagtacagccccacgtcacccacctacagccccaccagccccaagggatccacctacagc
cccacatcgcccggctacagccccacgtcacccacctacagcctcaccagcccggccatc
agccccgacgacagcgacgaggacaactga
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