Accipiter gentilis (Northern goshawk): 126035653
Help
Entry
126035653 CDS
T08649
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
agen
Accipiter gentilis (Northern goshawk)
Pathway
agen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126035653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agen03021
]
126035653
Enzymes [BR:
agen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126035653
Transcription machinery [BR:
agen03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
126035653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
126035653
NCBI-ProteinID:
XP_049650351
LinkDB
All DBs
Position
3:complement(42210428..42247386)
Genome browser
AA seq
1708 aa
AA seq
DB search
MRPPKVVPWRRLVGVSFGMYTAEEIRKLSVKPITNPQYLDNTGNPAINGLYDLALGPPDS
KEVCATCIQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCARAVVHLL
LSQLKVLEKGLLHAVHDLEVILNRFLEQCADATGSEIEEELNHHVQEILGSYQVRDQCSN
VKNVCECKNKLITQFWKAQMSSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVHHKSGEEGI
LDEPAAIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGMDPHESSGFSPDMFFL
DLLVVPPSRYRPINRVGDRLFTNGQTVNLQAVMKDAKMIRKLLVLMAKEQCQPIKIAEEE
TQTETGENNEPLDHSVLTMIPGQTLADKLYNAWIRLQSHVNIVFDSDMDKLMTEKYPGIR
QLLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPKVHPGASMVINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQSGLKIVC
RHIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYR
GLTDKKGRIKVFPPAIMKPQQLWTGKQVVSTLLINIIPENHIPLNLTGKAKIGGRAWVKG
PANRCLNLDSMCESQVIMRNGELMCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCL
GRLFTAYLQLYRGFTMGIEDILVKPEADHKRQKIIEKSSQHGIEAVRAALNLPETALCEE
VQGKWQDAHLCKDQRDFNMVDLKFKEEVNNYNNEVNKVCMPHGLHRSFPENNLQLMVQSG
AKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKP
SEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGE
DGLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALARMESHQANQQFKAIKKWRARHQN
SVQREGGFLMFCQKKMASVKAQITGGEIKNGRDPATLQLLKMWYELDEKKRRKYMKKTNK
CPDPSLGVWRPDTYFASVSETFENGVEDYINKWESENRQSYMRPALSSDRLKDLLYLKWQ
RSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASAKIKT
PMMSVPVFNTKKAFKKVKQLKRQLTRVCLAEVLQKVEIEESLRVKCKQNKHRLYKIKFHF
LPHEYYREEKCVKPKDILHFMETRFFKIFLEAIKRKNAKMASFTEVSTRKATRKDLDGDQ
DKALSNQEAPAEEEENIVDAEADEGDGDATEAKRRKNQEEEVDYESEEENGEENVDENLE
DEEAESEKEGAPGAEEDQNGADGDESQHLSFMSQAKREKDRFLQSAELRVNAVLDSHPSI
QDYTFDTKNELWCEVSLTLPLMKVYFDISSLLVSLARSTVIHEVKGITRCLLNESTNKQG
EKELVLHTEGINLVELFRYSDILDLNRLYSNDIHAMAKNYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGFYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgccgaaggtggtgccgtggcggcggctggtcggggtctccttcgggatgtac
acggccgaggagatcaggaaactgagtgtaaaacccataacaaatcctcagtatttggat
aatacagggaatccagccattaatggactgtacgacttggctttaggacctccagactcc
aaagaagtgtgtgcaacttgcatacagaacttcagcaactgtcctggtcattttggccat
atagaactgcctctgactgtctacaaccctctgttttttgataaattataccttctaatt
cggggttcttgtttaaattgtcacatgctgacatgtgctcgagctgtggttcacttactc
ttaagtcagctgaaggttctggagaaagggttgctacatgccgtccatgatcttgaagtc
attctgaacaggtttttagagcaatgtgcagatgcaacaggctcagaaattgaagaagag
ttaaatcaccatgttcaggaaatattaggaagttatcaagtaagagatcagtgttcaaat
gtcaaaaatgtgtgtgagtgtaaaaataaactgattacacagttctggaaagcacagatg
agttcaaagaaatgcccaaactgcaaatctagaagatcactggtgcgaaaggagcataat
agcaagctgacagtaacctatccttctacagtgcaccataaatcaggggaggaaggcatt
ctggatgagccagcagctattgatgaaagccagttagggaagagaggatacctgacaccg
atgactgccaaggaatacatcctggctctgtggaagaatgaaggtttctttttgcgttat
ctcttccctgggatggatccccatgaaagttcaggattcagtccagacatgtttttttta
gatctacttgtggttccaccttcaaggtatcgtcccataaatcgtgttggagaccgactg
tttacaaatggtcagactgtgaacttgcaggctgtcatgaaagatgccaaaatgatacgg
aagctcttggttctcatggcaaaagaacaatgtcagccaataaaaatcgcagaagaagaa
acccaaacagagacaggagagaataatgaacctctggaccattctgtcctaacaatgatt
ccaggacagacccttgcagataagctatacaacgcttggattcgtcttcagagccatgtt
aacattgtatttgatagtgacatggacaaactaatgacagaaaaataccctggtattcgt
cagctattagaaaaaaaggaaggactgttccgcaagcacatgatgggaaagcgtgtggat
tttgctgctcgatcagtcatttgccccgatatgtacattggtaccaatgagattggcatt
cctatggtatttgctaccaaactgacttatcctcagccagtcactccctggaatgtcaaa
gagctgaggcaggctgtcataaatggcccaaaggttcatcctggggcctccatggtcatt
aatgaagatggatctcgtacagtgttgagtgcaagcagcttgacccagagggaagccata
gctaagcaactcctcactccttcttcaggcgcgccccagtcaggactgaagattgtatgt
cgacatattaaaaatggagatgtccttttactgaaccgccagcccactcttcatagaccc
tccatccaagctcaccgggcccgaatactgcctggagaaaaagtgctgaggcttcactat
gccaactgcaaggcttacaatgctgattttgatggtgatgaaatgaacgcccattttcca
cagagtgagctgggtagagcagaagcctacaccttagcctttaccgatgaacagtatctg
gttccaaaggatgggaagccacttcctggcttgatccaggatcacatgatttctggagtc
agcatgacaatccggggctgctttttcaccagagagcaatatatggagcttgtttaccga
ggactaacagacaaaaaaggaagaattaaagtctttcctcctgccattatgaaaccacaa
cagttatggacgggaaagcaggttgtttctacattgttaataaacatcattccagaaaac
cacatcccactgaatttgactgggaaagctaagattggtggaagagcctgggtaaaggga
cctgcaaacagatgtctaaatcttgattcaatgtgtgaatctcaggttattatgagaaat
ggggaattaatgtgtggagtcttggacaaagctcactttggcagctctgcctatggcctg
gtccactgttgctatgaaatctatgggggtgaaaccagtgggaaagtgctaacgtgtcta
ggacgcctctttactgcttatctgcagctgtacaggggatttacaatggggattgaagat
attttggttaaacctgaagcagaccacaaaagacaaaaaatcattgaaaagtcaagccag
cacggtattgaagctgttagagctgctcttaatttgccagaaacagcattgtgtgaggag
gtccaagggaaatggcaggatgcgcatctctgcaaagaccagagggattttaacatggta
gatctgaaattcaaggaggaagtaaacaattacaacaatgaagttaacaaggtttgtatg
ccccatggtctccacaggagctttccagagaacaatttgcagttgatggtgcagtcagga
gccaaagggtctactgtaaatacaatgcagatttcttgtttgctgggccagattgagttg
gaaggtcgaagacccccactgatggcatctggcaaatcactgccatgtttccagccttat
gatttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcaaacct
tctgaattcttctttcactgcatggctggcagggaaggtctcgtggacacagctgtcaaa
accagccgttctgggtacctacaaaggtgtattataaaacatttggaaggactggtagtt
cagtatgacctgacagtacgagatagtgatggcagtgtggtgcagtttctgtatggagaa
gatggactcgatatccctaaaactcagttcttacaacctgagcaatttcctttcattgca
gaaaattatgaggtaatccagaagacaaaccatctggatgaagctttagcaaggatggag
tctcaccaagctaaccagcagttcaaagccatcaaaaagtggcgagccaggcaccaaaac
tctgtgcaaagagaaggaggttttctgatgttttgccaaaagaaaatggcaagtgtaaaa
gcacagattacgggaggagaaatcaaaaatggaagagatcctgctactttacagttattg
aagatgtggtatgaactagacgagaaaaaacgaagaaagtatatgaagaagacaaataaa
tgtcctgacccaagccttggtgtttggcgtccagatacttattttgcatctgtttcagaa
acgtttgaaaatggagttgaagattacatcaacaaatgggaatctgagaacagacaaagt
tacatgcgcccagcactttcttctgatcggttgaaggatttgttgtatttaaagtggcag
cgatctctttgtgacccaggagaagctgtgggtcttcttgcagctcagagtattggggaa
ccttccacacagatgactctgaacaccttccactttgctggcagaggtgaaatgaatgtc
acgttgggtattccaaggttgcgggaaatattgatggtggccagtgcaaaaattaaaaca
ccaatgatgagtgttcctgtgttcaataccaagaaagctttcaagaaggtgaaacagctt
aagagacagctcacgagagtgtgcttagctgaggtcttgcagaaagttgagatagaggaa
tccctgcgtgtgaagtgcaagcagaacaaacatcgcctctacaaaatcaaattccatttc
ttgccccatgaatattaccgagaggagaagtgtgtgaagcccaaggacatcttgcacttc
atggaaacaaggttctttaaaatttttctggaagcaattaaaaggaagaatgcaaagatg
gcatcttttactgaagtcagcacccggaaggcaactcggaaagatttagatggtgaccaa
gacaaggcactgagtaatcaggaagctccagcagaggaggaagagaacattgttgatgca
gaagctgatgaaggggatggtgatgctacagaagcaaaacggaggaagaaccaggaggaa
gaggttgattatgagagtgaagaagagaatggggaagaaaatgttgatgagaatctagaa
gacgaagaggctgaatcagaaaaagaaggggctcctggtgctgaagaagatcagaatgga
gcagatggtgatgaatctcaacatctttcctttatgtctcaggctaaaagagagaaagat
cgattccttcagtcagcagagttgcgagtaaatgctgttctggacagccacccatcaata
caggattacacatttgacaccaaaaatgaactttggtgtgaggtttcattgacacttcca
ttgatgaaggtgtactttgatatctcctccttgcttgtctctctcgcacgaagcacagtc
attcatgaagtgaaggggatcacacgatgcttgttgaatgaaagtactaataagcaagga
gagaaggaacttgttctgcataccgaagggataaaccttgtggagctgttcagatactct
gatattttggacctgaacagactttattccaatgatattcatgccatggctaagaattat
ggaattgagtctgccctgagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcggcacctttcacttgtggcagattacatgtgttttgaagga
ttttataaaccactgaatcgttttggaattcagtccaactcttcccctctgcaacagatg
acatttgaaaccagctacaaattcttgaaggaagcaacaatgatgggtgcccatgatgaa
ctgcgatctccttctgcatgcctagtggttggaaaagttgttaaaggagggactggtttg
tttgacctcaagcaaccccttacatag
DBGET
integrated database retrieval system
