Aphidius gifuensis: 122848361
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Entry
122848361 CDS
T07796
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
agif
Aphidius gifuensis
Pathway
agif03440
Homologous recombination
agif03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122848361
03460 Fanconi anemia pathway
122848361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agif03400
]
122848361
Enzymes [BR:
agif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122848361
DNA repair and recombination proteins [BR:
agif03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
122848361
FA (Fanconi anemia) pathway
Downstream FA components
122848361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
UPF0020
CNOT11
Motif
Other DBs
NCBI-GeneID:
122848361
NCBI-ProteinID:
XP_044002313
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All DBs
Position
LG2:complement(3804141..3839443)
Genome browser
AA seq
959 aa
AA seq
DB search
MSDISLVEDDMTDSSMEICPVPDLTGLSATMVDSSDDDSFDPPTPARRPINPPPPPPSTH
LDYSTIIITSDESDDDDNVDTKTTQPNKCSTVTSNAGDIKSSVNDKIVDVPFAGGGKSSV
NDKIVDVPFAGDGKSSDDVEIVDVPIDNSKRPTESMFKWDINNLTSTNQSLKRLPHSPME
STSKKSKIMMDEIVPCAVKVRGIVKKISGVHVEFPLNPYPSQSAVMCALIKSCQKRENAL
LESPTGSGKTLALLCAALAWQRQENVNYQRQLKEYRDSVRQELELSMADYDENVEKKNGQ
QSIDPSVLPPDRPAKIFYGSRTHRQITQVVKELKRTAYRNVKMTILSSRDFTCIQETKKN
KTEFCNDLLDPIKKKGCPFYASDPSSRPLSSHQDFDKVGLETPFDIEDLVTVGKDNGCCP
YFAARDLMQFSDIIFCPYNYLIDPSIRQSMSITLKDNVIILDEAHNIEDICRNSGSAVIK
INELTDIIQDLDTFAKNFKDENKHFITEPCPQFVPEIVKFCQVFMNFLKLVDLKTKVNSS
TPVSKYWTGPELVQVMHVNKMSTETIKSFINHCKDACEHAKDAKESMRDPKSGFKPSVSG
GIIRIIERFVFGLMSVTSVNAADYVVYVKEIVEWNSPKYADDDEFVSTKKETLRVIEFLC
LNPGVVFKPISETARSVILASGTLSPITSFASELQTKFYSISTNHVTPKDNVYVRSISKG
PNGADLLANYSNVQTWKFQDDVGQTIIDVCQTVPYGVLCFFSSYTVMTKITERMSLTKAM
QKVSSHKVIYSEPRTNDELTEIMDNYRKDCQKKGALLFAVFRGKVAEGIDFSDNEARAVI
TIGIPYGVRTDAAIECKLLYNDKYASRKNLLKGQDWYTVTAYRALNQALGRCIRHREDWG
AIIMIDSRFMYEKNQSYLPRWITQMWTDKSHMYDLPYKLKEFVKDRIQYYEQKELEDSM
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacataagtttggttgaagatgacatgacagattcatcaatggaaatctgtcca
gtaccagatttaacaggtctatcagcaacaatggttgattcatcagatgatgattcattt
gatccaccaacacctgcacgtcgaccaattaatccaccaccaccaccaccatcaactcat
cttgattattcaactatcattataacatcagatgagagtgatgatgatgataatgttgac
acaaaaacaacacagccaaataaatgtagcactgttacatcaaatgctggagacataaaa
tcatcagtaaatgataaaattgttgatgtaccatttgctggaggtggaaaatcatcagtc
aatgacaaaattgttgatgtaccatttgctggagatggaaaatcatctgacgatgtggaa
attgttgatgtaccaattgataattcaaaacgaccaacagaatcaatgtttaaatgggat
attaataatcttacatcaacaaatcaatcattaaaaagactaccacatagtccaatggaa
agtacgagtaaaaaatcaaaaataatgatggatgaaattgtaccatgtgcagttaaagtt
agaggtattgttaaaaaaatatcaggagtccatgttgaatttccacttaatccatatcca
tcacaaagtgctgttatgtgtgctctaataaaatcatgtcaaaaaagagaaaatgcatta
ttggaaagtccaactggaagtggaaaaactcttgctctattgtgtgcagcacttgcatgg
caacgtcaggaaaatgttaattatcaacgacaactcaaagaatacagagacagtgttaga
caagaacttgaactcagtatggctgattatgatgaaaatgtagagaaaaaaaatggtcaa
caatcaatcgatccatcagtattgcctcctgatagaccagcaaaaattttttatggatca
agaacacacaggcaaataacgcaggtcgttaaagaattgaaaagaacagcttacagaaat
gtcaaaatgacaatacttagcagtcgagactttacttgtattcaagaaacaaaaaaaaat
aagactgaattttgtaatgatttacttgatccaataaaaaagaagggttgtccattttat
gcatctgatccgagcagtcgtccactatcaagtcatcaagattttgataaagtaggtctt
gagacaccatttgatattgaagatttagttacagttggtaaagataatggttgttgtcca
tactttgcagcaagagatttaatgcaattttccgatataattttttgtccttataattat
cttattgatccatcaatacgtcaaagtatgtcaataacattaaaagataatgttattata
ttagatgaagcacataatattgaagatatttgtcgtaattctggaagtgcagttataaaa
ataaatgaattaactgatatcattcaagacttggatacatttgctaaaaattttaaagat
gaaaataaacattttatcacagagccatgtccacaatttgtacctgaaattgttaaattt
tgtcaagtatttatgaactttttaaagcttgttgatttaaaaacaaaagtaaatagttca
acaccagttagtaaatattggactggaccagaacttgtacaagttatgcatgttaataaa
atgagcactgaaacaataaaaagttttataaatcattgtaaagatgcatgtgaacatgct
aaagatgctaaagaaagtatgcgtgatccaaaaagtggttttaaaccaagtgtatcaggt
ggtataatacgtatcattgaaagatttgtatttggtttaatgtctgtaacatcagtaaat
gcagctgattatgttgtttatgttaaagaaattgttgaatggaatagtccaaaatatgct
gatgatgatgaatttgtatcaacgaaaaaagaaacacttcgtgttattgaatttctttgt
ttaaatccaggtgttgtatttaaaccaatatcagaaacagcaagatcagttattcttgca
tctggtacattatcaccaataacatcatttgcaagtgaattacaaacaaaattttattca
ataagtacaaatcatgttacaccaaaagataatgtatatgttcgttcaatatcaaaagga
ccaaatggtgctgatttattagcaaattatagtaatgtacaaacatggaaatttcaagat
gatgttggtcaaacaataattgatgtttgtcaaacagtaccatatggtgtattatgtttt
ttttcatcatacactgttatgactaaaataactgaacgaatgtcgctgacaaaagccatg
caaaaagtatcaagtcataaagtaatatatagtgaaccaagaacaaatgatgaattgact
gaaattatggataattatcgtaaagattgtcaaaagaaaggtgcattattatttgctgta
tttcgtggtaaagttgctgaaggaattgattttagtgataatgaagcaagagctgttata
acaattggtataccatatggagttagaacagatgcagcaattgaatgtaaattattgtac
aatgataaatatgcatctagaaaaaatttactcaaaggacaagactggtatactgttact
gcttatagagcacttaatcaagcacttggaagatgcataagacatcgtgaagattggggt
gcaattattatgatagattcacgttttatgtatgaaaaaaatcaaagttatttaccaaga
tggatcactcaaatgtggacagacaaatcacacatgtatgatcttccatataaattaaaa
gaatttgttaaagatcgtattcaatattacgaacaaaaagaacttgaagattctatgtaa
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