Agrobacterium tumefaciens H13-3: AGROH133_05985
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Entry
AGROH133_05985 CDS
T01432
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00260
Glycine, serine and threonine metabolism
agr00630
Glyoxylate and dicarboxylate metabolism
agr00785
Lipoic acid metabolism
agr01100
Metabolic pathways
agr01110
Biosynthesis of secondary metabolites
agr01200
Carbon metabolism
Module
agr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AGROH133_05985 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AGROH133_05985 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AGROH133_05985 (gcvP)
Enzymes [BR:
agr01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AGROH133_05985 (gcvP)
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Gene cluster
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ADY64336
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Position
circular:complement(1363840..1366704)
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AA seq
954 aa
AA seq
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MTTPTEFHFTDYQPYDFANRRHIGPSPSEMAEMLKVIGYKSLDALIDATVPSSIRQKVPL
TWGAALTEREALDRLRETANKNQVLTSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQ
PEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEAMAMCQRVAKSKATAFFVDA
NCHPQTIALIETRAAPLGWKVIVGNPFTDLDPVDVFGAIFQYPGTHGHVSDFSGLISRLH
QTGAIAAVAADLLALTLLKSPGEMGADIAIGTSQRFGVPVGYGGPHAAYMSVKDAHKRSM
PGRLVGVSVDARGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYGVFHGPQGI
KAIAQQTHQKAVLMAKGLEKLGYVIEPETFFDTITVEVGHMQGVILRSAVAEGVNLRKVG
ATKIGMSLDERTRPATLEAVWRAFGGNFSISDFELEYRLPKELLRTSQYMTHPIFHMNRA
ESEMTRYIRRLSDRDLALDRSMIPLGSCTMKLNATAEMLPITWPEFSDIHPFVPANQALG
YKEMIDDLSEKLCSVTGYDAFSMQPNSGAQGEYAGLLTIRNYHIANGGAHRDVCLIPTSA
HGTNPASAQMVGMKVVPVKVRENGDIDIDDFRAKAEQYAQNLSCCMITYPSTHGVFEETV
REICEITHKHGGQVYLDGANMNAMVGLARPGDIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKAHLAPYLPGHPTTDGREGAVSAAPFGSPSILPISWSYCLMMGGEGLTQATKVAILNA
NYIAERLKGAYDVLYKSETGRVAHECIIDTRPLADSCGVTVDDVAKRLVDCGFHAPTMSW
PVAGTLMIEPTESETKAEIDRFCDAMLAIREEARDIEEGRADKTNNPLKNAPHTVEDLVG
EWDRPYSREQGCFPPGAFRIDKYWSPVNRIDNVYGDRNLICTCPPMEAYAEAAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcccacggaattccatttcaccgactatcagccctatgatttcgccaaccgg
cgtcatatcgggccgtcgccgtcggaaatggcggagatgctgaaggtcatcggctacaag
agcctcgatgccctgatcgacgccaccgttccctcgtccatccgccagaaggtgccgctg
acctggggtgcagcgctgaccgaacgcgaggcgctcgaccgcctgcgcgagacggccaac
aagaaccaggtgctgacctcgctgatcggccagggctattacggtacaatcaccccgccc
gtgatccagcgcaacattctggaaaaccctgcctggtacaccgcctatacgccttaccag
ccagaaatcagccagggccgtcttgaggcgctgctgaactaccagacgatggtctgcgat
ctgaccggcctcgatgtcgccaacgcatcgctgctcgatgaagcgactgccgctgccgaa
gccatggcgatgtgccagcgcgtcgcgaagtccaaggcgactgccttcttcgtcgatgcc
aattgccatccgcagaccatcgcgctgatcgagacacgcgcggcgccactcggctggaag
gtgatcgttggtaatccctttaccgatcttgatcctgtcgacgtgttcggcgcgatcttc
cagtatccgggcacccacggtcatgtcagcgatttctcgggcctgatttcccgcctgcac
cagacgggtgccatcgctgccgttgccgccgatcttctggcgctgacgctgttgaagtca
cccggtgaaatgggtgcggatatcgctatcggcacctcgcagcgtttcggcgttccggtc
ggctatggtggtccgcatgcggcttacatgtccgtcaaggatgcacataagcgctccatg
cctggccgtctggttggcgtctcagtcgatgcgcgcggcaatcgcgcctatcgtctgtcg
ctgcagacccgcgagcagcatatccgccgcgagaaggctacctccaacatctgcaccgcg
caggtgctgcttgcagtcatggcgtcgatgtatggcgtcttccatggcccgcagggcatc
aaggcgattgcccagcagacccaccagaaggccgttttgatggccaagggcctggagaag
cttggctacgtcatcgagccggaaaccttcttcgacaccatcaccgtcgaagtcggccat
atgcagggcgtcatcctgcgctcggccgttgcggaaggtgtgaacctgcgcaaggtcggc
gcgaccaagatcggcatgagccttgacgagcgcacgcgtcccgcgacgcttgaggcggtc
tggcgcgcattcggcggcaatttctcgatctcggatttcgagttggaatatcgcctgccg
aaggaactgctgcgcaccagccagtacatgacgcatccgatcttccacatgaaccgtgcc
gaaagcgagatgacccgttacatccgccgtctttcggaccgtgatctcgcgctcgaccgc
tcgatgatcccgctcggttcctgcaccatgaaactgaacgcaactgcggaaatgctgccc
atcacgtggccggaattttccgacatccatcccttcgtgccagccaatcaggcgctcggc
tacaaggagatgatcgatgacctctcggaaaagctgtgctctgtcaccggttacgacgcc
ttctccatgcagccgaattccggcgcgcaaggggaatatgcggggctcctgaccatccgc
aactaccacatcgccaatggcggcgcacatcgcgacgtttgcctcattccaacctcggcg
catggcaccaatccagcctccgcgcagatggtcggcatgaaagtggtgccggtgaaagtg
cgggaaaacggcgatattgatatcgacgatttccgagcaaaagcagagcagtatgcgcaa
aacctctcgtgctgcatgatcacctatccgtccacccatggcgtgtttgaggagacggtt
cgcgagatttgcgagatcacccataaacacggtggtcaggtctatctcgacggcgccaac
atgaacgccatggtcggtcttgcccgtcccggcgatatcggttccgacgtcagccacctc
aacctgcacaagaccttctgcatcccgcatggcggcggcggtccgggcatggggccgatc
ggcgtcaaggcgcatcttgctccctatcttcccggtcatccgacgacggacggtcgtgaa
ggtgcggtttcggctgcccccttcggctcgccgtcgatcctgccgatttcctggagctac
tgcctgatgatgggcggcgaagggctgacgcaggcgaccaaggttgcgatcctcaacgcc
aactacatcgccgaacggctgaagggcgcttacgacgtgctctacaagtccgaaacggga
cgagtggcgcatgagtgcatcatcgacacccgaccgctggcagacagctgcggcgtgacg
gtggacgacgttgcaaagcgtctcgtcgactgcggtttccatgcgccgaccatgagctgg
ccggttgccggcacgctgatgatcgagccgacggagtccgagaccaaggcggaaatcgac
cgtttctgcgatgccatgctggcgatccgcgaggaagcccgcgacatcgaggaaggccgt
gcggacaagaccaacaatccgctgaagaacgcgccgcacacggtagaagatctcgtcggc
gagtgggatcgtccctacagccgcgaacagggttgcttcccgcccggcgccttccgcatt
gacaaatactggtcgccggtaaaccgcattgacaatgtctatggcgaccgcaacctcatc
tgcacctgcccgccgatggaggcttatgccgaggccgccgaataa
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