Anthonomus grandis grandis (boll weevil): 126748293
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Entry
126748293 CDS
T08911
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126748293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrg03021
]
126748293
Enzymes [BR:
agrg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126748293
Transcription machinery [BR:
agrg03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
126748293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
126748293
NCBI-ProteinID:
XP_050313380
EnsemblRapid:
ENSAGSG00005010115
LinkDB
All DBs
Position
2:41135840..41178531
Genome browser
AA seq
1582 aa
AA seq
DB search
MIKTRSVPKHFEPENVTFSIFTEKEIKDISVLQIVTPLTLDSLGHPILGGLYDNRLGPCT
DRSAPCGTCNKNITLCPGHFGFIDLPVPCENPLFHKVIGTILRYSCLSCHRLQITEVTRK
KIQALKEQNGEDVIQMSVIKLILEEVKMGKGCLFCKASMDKIQVLANRILMVTRRLDKSI
TNQKNKIQAMESKYINPSEAKNYLREIWTNEEDLIRIIAPVLDDIASEYPTDAFFFQVIP
VPPPNVRPVNYLNGRVLENPQTTVYKNILTNALVMNHLIRVVQKKGDTSVLVSKEAKEFY
DAAKGKTPIEKLNNCWEDLQSDVNGLLSKDPGMNREGIGLKQIIEKKEGIIRQHMMGKRV
NFAARSVITPDPNLDVGEVGIPEVFAKKLTFPVPVTPWNVEQLRQLIKNGPEVHPGAVLV
EMEDGSIKRINPENKTQQESLLKILLTPHNQRRGGFQGVKIVHRHLQNGDILLLNRQPTL
HKPSIMAHRARILKGEKTLRLHYANCKAYNADFDGDEMNAHFPQDEVARSEGYNIAEVAQ
QYLVPKDGTPLSGLIQDHMIAGVRLSLRGRFFGRMDYHQLVFQALSNKTDEITLLPPSIL
KPQPLWSGKQILSTVLINIIPKGKQLINLTASSKISARAWQKNKERPWKAGGTPFKNQNT
MTEAEVIIREGELLCGILDKTHYGATPYGLVHCVYELYGGRYAITLLSSFAKLFTRFLQQ
EGFTLGVHDILTVRKADKSRKKIIQESRQIGKQAIANALEIPVDSASVEEMAEMVEERCA
VDPKFRQIIDRSYKSSLDSFTNAINKCCLPAGLVCKFPENNLQLMVQSGAKGSTVNTMQI
SCLLGQIELEGKRPPVMISGKSLPSFTAFEFTPRAGGFIDGRFMTGIQPQEFFFHCMAGR
EGLIDTAVKTSRSGYLQRCLIKHLEGLHVGYDLTVRNSDQSVIQFLYGEDGMDIFKSQFF
NEKQMQFLQDNAKCIIQKDILHQLEKEEELQPVEEYRAKLQNWIKKNGSPLQKEKSSAYL
CFAQSLKEKYGKEVKRKKIEKLWRETKKSSDLEQILIDQLVCPDPINSVFQSDHYFGTLN
ERLDSLMTKFTEGKKKKEKKQFEKMFKLKGMQSMCAPGEPVGLLAAQSVGEPSTQMTLNT
FHFAGRGEMNVTLGIPRLREILMMASKNIKTPCMEIPFKSVDNLEERARELRKLLTRVVV
GDVLEKIDVTVNLDLNPVRQHRYTLTFQFLPSECYNQDYLASIKSILKHMKKKFFREMFI
AIAKVSKTKSNLVSMEQAPKTNIENEDSDDEVPKTKIPSKSKSVPKNDGDSSEDEVEDEE
DAKLVTKYRDQQEDQDPEDEEEKKDVESDEEIEGPEPDYAEDQSTDNTVLEKYNFANEYK
EDRAHHWCKLTFSLPMEYKKLDLTAILRDVAAKSVIWETPNIKRAITYVKDHELMMRTDG
INVGEMCKYHDLLQLDRLYCNDIHKMAETYGIEAASKIIVKEVKDVFNVYGIKVDPRHLS
LIADYMTFHGTFEPLSRRGMETSHSPLQQMSFESSLQFLKGSTIMGKKDDLQNPSSSLML
GKPCNTGTGSFKLLHNIPKLSV
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaacccgctcggttccaaaacactttgaacccgaaaatgtcaccttttcaata
ttcacggaaaaggagattaaagacatcagtgtactgcaaattgtgacccctttaacatta
gactcactggggcaccccattttggggggattgtatgacaacagacttggtccttgcaca
gaccgaagtgctccttgtggaacctgcaacaagaatattacattatgccctgggcatttt
ggctttattgacttaccggtaccatgtgaaaatcctttatttcataaagtaattggtaca
atactaagatactcctgcttaagctgccataggctccagattacggaagtaacaagaaaa
aaaattcaagcattaaaagagcaaaatggtgaagatgtcattcaaatgtcggttattaag
cttattttggaagaggtgaaaatgggtaaagggtgtcttttctgtaaagcaagtatggac
aagatacaggttttggctaataggattttgatggtcaccagaaggctcgacaagtccatt
accaatcaaaaaaataagatacaggccatggaatcaaaatatattaacccatcggaggca
aagaattatttgagggaaatttggaccaatgaggaggaccttattaggataattgctcca
gttttagatgatattgcctccgaatatccaacagatgcctttttctttcaagttatccca
gttcctccaccgaacgtacgtcctgttaactatttgaatggccgagtactagaaaaccct
caaactactgtctataaaaatatattgactaacgccttggtcatgaaccatcttataaga
gttgtccagaaaaaaggtgatacaagtgttttagtctcgaaagaggctaaagagttttat
gatgctgccaaaggaaaaactccaatcgaaaagctgaataactgttgggaagatttgcaa
agcgatgttaatggattgttatcaaaagatcctggaatgaatagagaggggattggatta
aaacaaatcattgagaagaaagaagggataattcgacaacacatgatgggaaaacgtgta
aatttcgccgctaggtcagttattactccagaccctaatctggatgtaggtgaagtggga
atcccggaagtttttgccaaaaagctcacatttcctgttccggttaccccatggaacgtt
gagcaactcagacagcttattaaaaatggtccagaagttcatccaggagcggttttagtg
gagatggaagacggttccattaaaagaatcaatccagaaaacaagacacagcaagaaagc
ttattaaagattttattaacacctcataatcaacgtagaggaggtttccaaggagtgaaa
atcgtgcataggcaccttcaaaacggtgatattttactgttgaacagacagcctacattg
cataagccttccataatggcacatagagcaaggattttgaagggggagaaaacattaagg
ttgcattatgctaattgcaaagcatacaatgcagattttgatggtgacgaaatgaacgct
cattttcctcaagacgaagttgccaggagtgagggatataatattgccgaggtggcgcaa
cagtacctggtacccaaagacggtactcctctaagtggcttaattcaagatcacatgatt
gctggagtaagattatcgttaagagggagatttttcggaagaatggactatcatcaacta
gtgtttcaagcactctcgaacaaaaccgatgagatcacgctactgcctccgtcaatatta
aaaccccaacctttatggtcgggtaaacaaatcttatccacggtgcttataaacatcatc
ccgaaaggtaaacaactgattaacttaacggcttcctccaagatatccgcgagggcatgg
cagaaaaataaggagaggccttggaaagctggcgggaccccttttaaaaaccaaaatacc
atgaccgaagccgaagttattatacgggaaggcgaacttttatgcggaatcttggataaa
acccattacggggccaccccgtacggtctggtgcattgcgtttacgagctttatggtgga
agatacgcaattacgttgcttagttcgtttgcaaagctttttaccagatttttgcaacaa
gaaggtttcactttgggcgtacacgatattttgacggtacgaaaggccgacaagagcaga
aagaaaattatccaagagtccaggcagatcggcaaacaggccattgccaatgccttggaa
attcctgtcgatagcgcgagcgttgaagaaatggccgaaatggttgaagaaaggtgtgct
gtagacccgaaatttagacagataatcgatcgttcgtacaaatcatctctcgactctttt
acaaacgcgattaacaaatgttgcctaccagccggcttagtttgcaaatttccggaaaat
aatttacaattaatggttcaatctggtgcgaaaggttccacagtaaacactatgcagatt
tcttgtttgctgggacaaattgagttggaaggcaagagacctcccgttatgatttcagga
aagtcccttcccagttttacagcctttgaattcacccccagggcaggaggttttatcgat
ggtcgttttatgaccggaattcaaccacaagagtttttctttcattgtatggcaggtaga
gaaggacttattgatacagcagtaaaaactagcagaagtggctacttgcagagatgtctt
ataaagcacttggaaggtcttcatgtgggatacgatttaactgttagaaacagtgaccaa
agtgttattcagttcctctacggcgaagacggcatggatattttcaagtctcagtttttc
aatgaaaagcaaatgcaattcttgcaagataacgctaaatgtatcattcaaaaggatata
ttgcaccagttggaaaaggaggaagaactgcaaccggttgaggaatatcgcgccaagtta
caaaattggattaagaaaaacgggtcgccgttacaaaaagagaaaagttcggcttatttg
tgctttgcgcagagtttaaaggagaaatatggtaaagaagtgaaacgaaagaaaatcgag
aagttatggagggaaaccaagaaatcgagcgatttggagcaaattttgatagaccagttg
gtttgtcctgacccaataaattcggtcttccaatcggaccattacttcggaaccctaaac
gaacgcctggactctctaatgaccaaattcaccgaaggcaaaaagaaaaaagagaaaaaa
caattcgagaaaatgtttaaattaaagggcatgcaaagcatgtgcgctcctggcgaacct
gtcgggctattagccgcgcaatccgtaggcgagccttcgacccaaatgaccctaaacacc
tttcactttgccggccgtggtgaaatgaacgtgaccctcggtataccgcgtttaagggaa
atcctgatgatggcttcgaaaaatatcaagacgccctgcatggaaattccgtttaagagt
gtagacaacttggaggaaagagcgagagagcttaggaaactgctgaccagggtagtggtg
ggagacgttttagaaaaaattgacgtgactgttaatttggatttgaatcccgttaggcag
cacagatataccttaacttttcaattcctaccctcagaatgttataatcaagattacctg
gcatccattaaatcaattctaaaacatatgaaaaaaaagttcttcagggaaatgtttatt
gctatagcgaaagtgtcgaaaacaaaatcaaacctggtttctatggaacaagcaccaaaa
actaatatagaaaacgaggacagtgacgatgaagtacccaagacaaaaatcccatcgaaa
tcaaaatctgtgccgaaaaatgacggagacagttccgaagatgaggttgaggatgaagaa
gacgcgaaactagttacaaaataccgagatcagcaagaggatcaggacccagaagatgag
gaagagaaaaaggatgtcgaaagtgatgaagaaatcgagggaccggagcccgattatgcc
gaagaccaatccacagataacacggttttggaaaaatataatttcgccaatgagtacaaa
gaagatagagcgcaccattggtgcaaactgacctttagtttgcccatggaatacaaaaag
ttggatttgactgctatcttgagagacgtcgccgctaaaagtgttatctgggagaccccg
aatattaaaagggcgataacttacgtgaaagatcacgaattgatgatgagaaccgatggg
attaatgtgggagagatgtgcaaataccacgatttactacagttagatcgattgtattgt
aacgatattcacaaaatggccgagacttatggaatcgaagccgcctcaaaaatcattgtt
aaggaggtcaaagacgtctttaatgtatatggcatcaaggtggatccgagacatttatcc
cttatagcagattatatgacgtttcatggtacttttgaacctttaagtagaagaggaatg
gaaaccagtcattcgcctttacagcagatgtctttcgagtcgtctttgcagtttttgaaa
ggttctactatcatggggaaaaaagacgatttacaaaacccctctagtagccttatgctc
ggaaaaccgtgtaatacgggtactgggtcgtttaagcttttacataacataccgaaatta
agtgtgtaa
DBGET
integrated database retrieval system
