Agrococcus sp. Marseille-Q4369: JSQ78_13550
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Entry
JSQ78_13550 CDS
T09684
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Pathway
agro00260
Glycine, serine and threonine metabolism
agro00630
Glyoxylate and dicarboxylate metabolism
agro00785
Lipoic acid metabolism
agro01100
Metabolic pathways
agro01110
Biosynthesis of secondary metabolites
agro01200
Carbon metabolism
Module
agro_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JSQ78_13550 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JSQ78_13550 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JSQ78_13550 (gcvP)
Enzymes [BR:
agro01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
JSQ78_13550 (gcvP)
BRITE hierarchy
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QUW18782
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Position
2696967..2699825
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AA seq
952 aa
AA seq
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MRPFVDRHIGTDAAAQERMLGAVGFDSLEALMDAAVPAGIRSAGTGIGEAATETQALAEL
RALASRNRVRHSAIGLGYAGTVTPAPIKRLILENPSWYTAYTPYQPEISQGRLEALINFQ
TMVADLAGLDVANASMLDEGTAVVEAMLLARRASKSPSSVFVVDTDLLPQSRALLRHRAH
RTGIELVELPLATIDPADLPDSFGVVAQLPGASGLVWDARGIFAASTAMGGVPVAAADLL
ALALIEAPGHQGARIVVGSSQRFGVPMGFGGPHAGFMAVAEQLTRQMPGRLVGVSVDAEG
YPAYRLTLQTREQHIRREKATSNICTAQVLLAVMASMYGVYHGPDGITAIAEGVHAVATR
FARAAREAGIELVHEHFFDTVRMRVPGRARELQASAADAGILVHVVDDDTLHVAFDETWA
ELGTGVRLDALLPALGLADAGPADARTGDRAIPATLARESEFMTHEVFHAHRSETQLMRY
AKRLSDRDYALDRGMIPLGSCTMKLNAAAEMEAITWPEFSQPHPYGPLEDAEGSLALIDQ
LGEWLARITGYDTVSLQPNSGAQGELAGLMAIRGWHDSRGDGHRDVVLIPASAHGTNAAS
AVLAGMRVVVVATRGNGDVDVDDLEAKIGTHAGQLAALMITYPSTHGVYESEIRRITDLV
HEAGGQVYIDGANLNALLGHATFGDMGGDVSHLNLHKTFCIPHGGGGPGVGPVAAKAHLA
PFLPRDPREQAQEIDGVRIGANPISAAPWGSASILPISWAYVRMMGLEGLTKATASAVLA
ANYIATRLREHYPVLYTGEHGLVAHECILDLRPLKEATGVTNDDVAKRLVDFGFHAPTMS
FPVAGTLMVEPTESEDLAELDRFVDAMIAIKAEAEAIGRGEVPLDESALRRAPHTPGSIV
HGEWDRPYSREQAVFPVPGIERAKYWPPVARVDQAYGDRNIVCSCPPVEAFA
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccttcgtcgaccgccacatcggcaccgatgcggcggcgcaggagcgcatgctc
ggcgccgtcggcttcgactcgctcgaggcgctcatggacgccgcggtccccgcgggcatc
cgctcggccggcaccggcatcggcgaggcggcgaccgagacgcaggcgctcgccgagctg
cgcgcgctcgcgtcgcgcaatcgcgtgcgccactcggcgatcggcctcggctacgccggc
acggtcacgcccgcgccgatcaagcgcctcatcctcgagaacccctcgtggtacacggcc
tacacgccctaccagcccgagatcagccagggccgcctcgaggcgctcatcaacttccag
acgatggtcgccgacctcgcggggctcgacgtcgccaacgcgtcgatgctcgacgagggc
accgcggtcgtcgaggcgatgctgctcgcgcgccgcgcctcgaagtcgccgtcctccgtc
ttcgtcgtcgacaccgacctgctgccgcagtcgcgggcgctgctgcgccaccgcgcccat
cgcacgggcatcgagctcgtcgagctgccgctcgccacgatcgacccggccgacctcccc
gactccttcggggtcgtcgcgcagctgccgggcgcatccggcctggtctgggacgcgcgc
ggcatcttcgcggcctcgaccgcgatgggcggcgtgccggtcgccgcggccgacctgctc
gcgctcgcgctcatcgaggcgccgggccaccagggcgcgcgcatcgtcgtcggctcctcg
cagcgcttcggcgtgccgatgggcttcggcggcccgcacgcgggcttcatggccgtcgcc
gagcagctcactcgccagatgcccggccgcctcgtcggcgtctcggtcgacgccgagggc
taccccgcctaccggctcacgctccagacccgcgagcagcacatccgccgcgagaaggcc
acgagcaacatctgcaccgcacaggtcctgctcgccgtcatggcgtcgatgtacggcgtc
taccacgggcccgacggcatcaccgcgatcgccgagggcgtccacgcggtcgcgacgcgc
ttcgcccgcgcggcgcgagaggcgggcatcgagctcgtccacgagcacttcttcgacacc
gtgcggatgcgcgttcccggccgggcgcgcgagctccaggcgagcgcggccgacgcgggc
atcctcgtgcacgtcgtcgacgacgacaccctgcacgtcgcgttcgacgagacgtgggcc
gagctcggcacgggggtgcgcctcgacgcgctgctgcccgcgctcgggctcgccgacgcg
ggccccgccgatgcacgcacgggggatcgggcgatcccggcgacgctcgcgcgcgagagc
gagttcatgacgcacgaggtcttccacgcgcaccgctccgagacgcagctcatgcgctac
gcgaagcggctctccgaccgcgactacgcgctcgaccggggcatgatcccgctcggctcg
tgcacgatgaagctcaacgccgccgccgagatggaggccatcacgtggcccgagttctcg
cagccgcacccgtacggcccgctcgaggacgccgagggctcgctcgccctcatcgaccag
ctcggcgagtggctcgcgcgcatcaccggctacgacaccgtctcgctgcagcccaattcg
ggcgcgcagggcgagctcgcgggcctcatggccatccgcggctggcacgactcgcgcggc
gacggccaccgcgacgtcgtgctcatccccgcttcggcgcacggcacgaacgcggcgagc
gccgtgctcgccggcatgcgcgtcgtcgtggtcgccacgcgcgggaacggcgatgtcgac
gtcgacgacctcgaggccaagatcggcacgcacgcggggcagctcgccgcgctcatgatc
acctacccgtcgacgcacggcgtctacgagtccgagatccgccgcatcaccgacctcgtc
cacgaggccggcggccaggtctacatcgacggcgcgaacctcaacgcgctgctcggccac
gcgaccttcggcgacatgggcggcgacgtctcgcacctcaacctgcacaagacgttctgc
atcccgcacggcggcggcgggccgggcgtcggcccggtcgcggcgaaggcgcacctcgcg
ccgttcctgccgcgcgacccgcgggagcaggcgcaggagatcgacggcgtgcgcatcggc
gccaacccgatctcggccgcgccgtggggctctgcgtcgatcctgccgatctcgtgggcg
tacgtgcgcatgatggggctcgagggcctcacgaaggccaccgcgagcgccgtgctcgcc
gcgaactacatcgcgacgcgcctgcgcgagcactacccggtgctctacacgggtgagcac
ggcctcgtcgcgcacgagtgcatcctcgacctccgcccgctcaaggaggcgaccggcgtc
acgaacgacgacgtcgcgaagcggctcgtcgacttcggcttccacgcgccgacgatgtcg
ttccccgtcgcgggcacgctcatggtcgagccgacggagtcggaggacctcgccgagctc
gaccgcttcgtcgacgcgatgatcgcgatcaaggccgaggccgaggcgatcggccggggc
gaggtgccgctcgacgagagcgccctgcgccgcgcgccgcacacgcccggctcgatcgtg
cacggcgagtgggatcgcccctactcgcgcgagcaggccgtcttcccggtgccgggcatc
gagcgggcgaagtactggccgcccgtcgcgcgcgtcgaccaggcgtacggcgaccgcaac
atcgtctgcagctgcccgccggtggaggccttcgcctga
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