KEGG   Aphis gossypii (cotton aphid): 114126948
Entry
114126948         CDS       T05869                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit Rpb4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ags  Aphis gossypii (cotton aphid)
Pathway
ags03020  RNA polymerase
ags03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ags00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114126948
  09124 Replication and repair
   03420 Nucleotide excision repair
    114126948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ags03021]
    114126948
   03400 DNA repair and recombination proteins [BR:ags03400]
    114126948
Transcription machinery [BR:ags03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     114126948
DNA repair and recombination proteins [BR:ags03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114126948
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Rop
Other DBs
NCBI-GeneID: 114126948
NCBI-ProteinID: XP_027846810
LinkDB
Position
Unknown
AA seq 138 aa
MAQHTNTAVDEDAALLQFPKEFENAETLLISEVNMLLKFRKNQNESAEEEQEFSEVFNKT
LTYTEQCSKFKNKETIVAVRNLLASKKLHKFELASIGNLCPQLADEAKSLIPSLEDRFDD
DELQQILDDIQAKLSIQY
NT seq 417 nt   +upstreamnt  +downstreamnt
atggcacaacatacgaacactgctgtagacgaagacgccgcgctgttgcaatttccaaaa
gaattcgaaaacgctgaaaccttacttatttccgaagttaatatgttgttaaaatttcgc
aagaatcaaaatgaaagtgccgaagaagaacaagaattttcggaagtgtttaataaaaca
ctgacgtatacagagcagtgttccaagttcaaaaacaaagaaaccattgtagctgtgagg
aatttacttgccagcaaaaaattgcacaagtttgaactggcatcaattggtaatttatgt
cctcaactcgctgatgaagctaaatcacttattcctagtttggaagatagatttgatgac
gatgaattacaacaaattctagatgatatacaagctaaattaagtattcagtactaa

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