Agarivorans sp. TSD2052: M0C34_04120
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Entry
M0C34_04120 CDS
T08089
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz00260
Glycine, serine and threonine metabolism
agz00630
Glyoxylate and dicarboxylate metabolism
agz00785
Lipoic acid metabolism
agz01100
Metabolic pathways
agz01110
Biosynthesis of secondary metabolites
agz01200
Carbon metabolism
Module
agz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
M0C34_04120 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
M0C34_04120 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
M0C34_04120 (gcvP)
Enzymes [BR:
agz01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
M0C34_04120 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UPW19474
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Position
898149..901034
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AA seq
961 aa
AA seq
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MNPSLPLNELEQNQDFIRRHIGPDQAEVSTMLKQLGLNSVEQLIEQTVPEQIRLSQGLNI
GDSLTEQQALAALRTLAKQNKVYRSYIGMGYNNTHVPHVILRNVFENPGWYTAYTPYQPE
IAQGRLEALLNFQQLSLDLTGLELASASLLDEATAAAEAMALAKRVSKNKKCNLFFIADD
VHPQTIDVVKERADFFGFDVEVGPAESVVKHNVFGALLQYPGTTGRVRDLSELIEQVHSN
KGIVAVAADIMALVILKSPGAMGADVVLGCAQRFGVPMGYGGPHAAFFATRDAYKRSLPG
RIIGVSKDRRGKPALRMALQTREQHIRREKANSNICTAQVLLANMASFYAVFHGPDGLRI
IAQRIHRLTAILAHGLEAKGLSPEHAQYFDTLSIKVSDKDAINARSEALGINLRMDLDGA
VALSLDETTTAADVNDLFTVLLGEDHGLDAARLDAVVQGETCIPATLLRDTPILEHEVFN
RYRSETDVLRYIRKLESKDLALNHSMISLGSCTMKLNATAEMIPVTWPEFSSMHPFCPSD
QAQGYHAMISQLEDWLVNITGYDSICMQPNSGAQGEYAGLLAIQKYHASRGDHHRNICLI
PSSAHGTNPASAQMANLKVVVVACDKLGNVDMDDLRSKAEELSEQLSCVMITYPSTHGVY
EETIKELCDVIHDNGGQVYMDGANMNAQVGITSPGSIGSDVSHLNLHKTFAIPHGGGGPG
MGPIGVKAHLAPFVAGHSVVSNGKASHANAAVSAAPYGSASILPISWMYVAMLGNEGLRQ
SSEIAILNANYLASRLSQAFPILYSGKNGRVAHECIIDMRPLKEATGISEMDVAKRLNDY
GFHAPTMSFPVAGTLMVEPTESESLAEIDRFIDAMLSIRAEIAKVETGEWTLQDNPLVFA
PHTLDDITDAQWTHNYSRELAVFPCAAVKQNKFWPTVNRIDDVFGDRNLFCACLPMEAYQ
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaacccctctttgcctttaaacgaactagagcaaaaccaagactttattcgccgccac
attggccccgatcaagccgaagttagtaccatgctcaagcagctgggccttaactcggta
gagcaacttatcgagcaaacggtgcccgagcaaattcgcttaagccaaggtttaaacatt
ggtgatagccttactgagcaacaagccttagccgcgctccgcacgcttgctaagcaaaac
aaggtgtaccgcagttacataggcatggggtataacaacacccatgtaccgcatgtcatt
ttgcgtaacgtatttgaaaaccccggttggtacaccgcttacacgccttaccagccagag
atagcccaaggccgcttagaagcactgcttaattttcagcagttaagcctagacctcacc
gggctagagttagccagtgcatcactgctagacgaagccaccgccgcggcagaagccatg
gcactggccaagcgcgtctctaaaaacaaaaaatgtaacctgttttttattgccgacgat
gtacacccacaaaccatcgacgtagtaaaagagcgtgccgacttctttggtttcgacgta
gaagtaggcccagccgagagcgtagtaaaacacaatgtatttggcgctttactgcaatac
cctggcaccactggccgagtacgtgatttaagtgagctaatcgaacaggtacatagcaac
aaaggcattgtggcagtagcggccgacattatggccttggtaatacttaaatcaccgggc
gcaatgggcgccgacgtagtgctaggttgtgcgcaacgttttggtgtacctatggggtac
ggcggcccacatgcggcattttttgcaactcgcgacgcttacaaacgctcactgccgggg
cgtattattggcgtctctaaagatcgccgcggcaagccagctttgcgtatggctttgcaa
acccgcgagcaacatattcgccgcgaaaaagccaactcaaacatttgtaccgctcaagta
ttactggccaacatggcctcgttttacgcggtatttcatggcccagacggcctacgtatt
attgcccagcgtattcaccgcttaacggctattttagcccacggcctagaagccaaaggc
ctaagcccagagcatgcccaatactttgatactctaagcattaaggttagcgacaaagac
gcgattaacgcgcgtagcgaagcgctaggcattaacctacgtatggacctagacggcgca
gtggcgcttagcctggatgaaaccaccaccgcagctgatgtaaacgacctattcacggta
ttactaggcgaagaccacggcttagacgcggcacgcttagacgccgtcgtgcagggcgaa
acctgtattccagccacgctattacgtgatacacccattttagagcacgaagtatttaac
cgttaccgcagcgaaaccgatgtactgcgttacattcgcaagctagagagcaaagactta
gcgttaaaccactcgatgatctcgctaggctcgtgcaccatgaagctaaacgccaccgcc
gagatgatcccagtcacttggccagagttttctagcatgcacccgttctgcccaagtgac
caagcgcagggctaccacgccatgattagccagctagaagattggctagtaaacattacc
ggttacgattcaatttgtatgcagcctaactcgggcgcgcagggcgaatatgcaggcttg
ttagcgattcaaaaataccacgctagccgcggcgaccatcaccgtaatatttgtttaatc
cctagctcggcgcacggtactaacccggcctcggcgcaaatggctaacctaaaagtagtg
gtagtggcttgtgataagctgggtaacgtagacatggatgacttgcgcagcaaagctgaa
gagctttcagagcagttatcttgtgtaatgatcacctacccaagtacccacggtgtatac
gaagaaaccattaaagaactgtgtgacgttattcatgacaatggcggccaagtgtacatg
gacggcgccaacatgaacgctcaagtaggtattacctcaccgggctctattggctcagac
gtaagccacttaaacctacataaaacctttgctattccgcacggcggtggtggcccaggc
atggggccaattggggtaaaagcccacttagcgccgtttgtggcaggccacagcgtagta
agcaatggcaaagccagccatgctaacgcggcagtatcggcagcgccttacggcagtgcc
tctatcttgcctattagttggatgtacgtagccatgttaggcaacgaagggctacgccaa
tcatcagagattgccatactcaacgccaactacctggctagccgtttaagccaagccttc
cctattttgtatagtggtaaaaatggccgcgtagcgcacgagtgtattattgatatgcgc
ccactgaaagaagccactggcattagcgaaatggacgtagccaagcgcttaaacgactac
ggctttcacgcgcctaccatgagcttcccggtagcgggcacgctaatggtagagcctacc
gagtcagaatcgctagctgaaatcgaccgctttattgatgcgatgttatcgatacgcgcc
gagatagccaaagtagaaaccggcgagtggaccctgcaagacaacccactagtgtttgcc
ccgcataccctagacgatattaccgacgcccagtggacccacaactacagccgcgagcta
gcggtgttcccatgtgctgcggttaagcaaaataaattctggcctaccgtaaaccgtatt
gatgacgtgtttggagatagaaatttattctgcgcatgccttccgatggaagcttatcaa
gagtaa
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