KEGG   Agarivorans sp. TSD2052: M0C34_15170
Entry
M0C34_15170       CDS       T08089                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
agz  Agarivorans sp. TSD2052
Pathway
agz00740  Riboflavin metabolism
agz01100  Metabolic pathways
agz01110  Biosynthesis of secondary metabolites
agz01240  Biosynthesis of cofactors
agz02024  Quorum sensing
Module
agz_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:agz00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    M0C34_15170 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    M0C34_15170 (ribD)
Enzymes [BR:agz01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     M0C34_15170 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     M0C34_15170 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD APOBEC3
Other DBs
NCBI-ProteinID: UPW17569
LinkDB
Position
complement(3341675..3342805)
AA seq 376 aa
MNFSVADSQFMARAISLAKRGCYTTAPNPNVGCVLVKNGQVIGEGYHQKAGEGHAEVKAV
ANAKARGHSLQGASCYVTLEPCSHVGRTPACATMLVELQVAEVIIAMVDPNPQVAGRGIK
RLEHAGVKVRTGLMEQAARSLNPGFLSRIERKRPFVRLKLAGSIDAKTALANGESKWITS
AYSRSDVQRERARSHAILSTAATVLRDNASLNVRHVELGSLRQQLAAKDLRQPLRIIVDR
QQRLSAAPKTLNIFQHPQSLWVAGLALQPELTAAKQLTFNEEGGLLSLLEQLAEAEINDL
WVEAGSQFAAALIKADVVDQLICYQAGLLMGADANSLVELKGFTKMSELKSWMCLETRQV
GPDIKTIWIPQSQGVQ
NT seq 1131 nt   +upstreamnt  +downstreamnt
gtgaatttttcagtggctgatagccagtttatggcacgcgcaattagcctggccaaacga
ggttgctataccacggctcctaatcctaacgtcggttgtgtattggtgaaaaacggccaa
gtaattggcgaggggtatcaccaaaaagctggtgaggggcacgctgaagtcaaggcggta
gcgaatgccaaagcacgtggccatagcctacaaggggctagctgttacgttacacttgag
ccttgtagccatgtggggcgaacaccggcttgcgcaacgatgctcgttgaattgcaagtt
gctgaagtcattattgccatggtagaccctaatcctcaagtggctgggcgtggtattaaa
cgcttagaacacgcaggggtaaaggttcgtacagggctaatggaacaagctgcgcgatcg
ctaaaccccggcttcttaagtcgaattgagcgcaaacggccgtttgttcgtttgaagttg
gccggttctattgatgctaaaacggcattggcgaacggtgaaagcaaatggatcacatcg
gcctattcgcgcagcgatgtgcagcgtgaaagagcgcgtagccatgcaattttatctaca
gccgccacggtattgcgagataatgccagtttaaatgtacgccatgtcgaattgggcagt
ttaaggcagcaactggcagctaaagatttacgtcagccattgcggattattgttgatcgc
caacagcgcctttctgctgcgcctaaaacacttaatatatttcaacaccctcaatctcta
tgggttgcaggcttagcattacagcctgaacttacagcggctaaacagctcacctttaat
gaagagggtggtttgctgagtttgttagaacaattggccgaggcagagataaatgactta
tgggttgaagcggggtcacagtttgctgcggcactcattaaggctgatgtcgttgaccaa
ttaatctgttatcaagcgggtttgttaatgggggccgatgccaatagcttagttgagcta
aagggctttactaaaatgagcgagctaaaatcttggatgtgccttgaaactcgacaagtt
ggccctgatattaagactatctggatcccgcaatcacagggtgtgcaataa

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