Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_4232
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Entry
AHA_4232 CDS
T00424
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Pathway
aha00540
Lipopolysaccharide biosynthesis
aha01100
Metabolic pathways
aha01250
Biosynthesis of nucleotide sugars
Module
aha_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AHA_4232 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
aha01005
]
AHA_4232 (rfaD)
Enzymes [BR:
aha01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
AHA_4232 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
aha01005
]
Core region
AHA_4232 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
TrkA_N
KR
Motif
Other DBs
NCBI-ProteinID:
ABK35918
UniProt:
A0KQV3
LinkDB
All DBs
Position
complement(4685503..4686459)
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AA seq
318 aa
AA seq
DB search
MIVVTGGAGFIGSNLVKQLNAQGRTDVVVIDDLTDGTKFVNLVDLTIADYMDKDEFQARI
VSGDEFEEWDGGIEVIFHEGACSATTEWNGKFIMEVNYEYSKDLFHYCIEREIPFIYASS
AATYGGRNDNFIEDPKFEQPLNVYGYSKQLFDQYVRRWMPEINSQVVGLKYFNVYGPREQ
HKGSMASVAFHLNTQVKKGENPKLFEGCDGFPNGGQMRDFIYVDDVCKVNLWFWLNPQHS
GIFNCGTGRAEPFQNVAEAVIKHHQKGAIEYIPFPDHLKGRYQSFTQADMTKLRGVGYDA
EFKTVAEGVADYMAWLNR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtagtaactggcggtgctggctttatcggcagcaatctggtcaagcagctgaac
gctcaaggacggaccgatgtggtggtcatcgatgacctgaccgacggcaccaagttcgtc
aatctggtcgatctgaccattgccgattacatggataaggatgagttccaggcgcggatc
gtctccggcgacgaatttgaagagtgggatggcggcatcgaggtgatcttccacgaaggt
gcctgctccgccaccaccgagtggaatggcaagttcatcatggaggtcaactacgagtac
tccaaggatctgttccactactgcatcgagcgtgaaattccgttcatctacgcctcctct
gctgcaacctatggcgggcgcaacgacaacttcatcgaagatccgaagttcgagcagccg
ctcaacgtctacggctactccaagcagctgttcgaccagtacgtgcgtcgctggatgccg
gagatcaactcccaggtggtcggcctcaagtacttcaacgtctatggcccgcgcgagcag
cacaagggctccatggcctcggttgccttccacctcaatacccaggtgaagaagggcgag
aatcccaagctgttcgaaggctgcgacggtttccccaacggcggccagatgcgcgatttc
atctatgtggatgacgtctgcaaggtgaacctctggttctggctgaatccgcagcactcc
ggcatcttcaactgtggtaccggtcgggccgaaccgttccagaacgtggccgaagcagtg
atcaagcatcatcagaagggtgccatcgagtatattcccttcccggatcacctcaagggt
cgctatcagagcttcactcaggctgacatgaccaagctgcgtggcgtcggctatgacgcc
gagttcaaaaccgtggccgaaggggtcgcggattatatggcgtggctcaaccgctaa
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