Alkalicoccus halolimnae: FTX54_007105
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Entry
FTX54_007105 CDS
T09800
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ahal
Alkalicoccus halolimnae
Pathway
ahal00190
Oxidative phosphorylation
ahal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
FTX54_007105
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTX54_007105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahal03019
]
FTX54_007105
Enzymes [BR:
ahal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
FTX54_007105
Messenger RNA biogenesis [BR:
ahal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FTX54_007105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Hikeshi-like_C
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
WWD81308
LinkDB
All DBs
Position
complement(1577208..1579289)
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AA seq
693 aa
AA seq
DB search
MTKDTRNNFQNPEYYHNRELSWLRFNERVLEEAIDTSNPLLERLKFLAIFSSNLDEFFMV
RVAGLIDQVKAGYNRPENKTALTPKQQLEKIALQNQELVTRQYTHFKEKLVPELKKHDIH
FIRPKDLSDKDYKRMRRHFKDYILPVLTPMAIDAYRPFPKLSNKSINLAVVLASGTEKKL
AIVQVPSVLSRTVAVESGSSTKFILLEDLITEFIDRLFSGFTIISVSPFRITRNADLTIH
EEGARDLLREIEKELKKRKWGAAVRFEMENDNMDKNVLSLLMDVLELHENDIYRVNGPLD
FTFLFKFHSLLAPVFEKLVYETSIPQPPEDLLHKENIMGAMMEKDLFIHHPYESFQPVVD
LMFQAAEDEKVLAIKQTLYRVSGESPIIAALARAAELGKQVTVLVELKARFDEENNIQWA
KQLEKAGCHVIYGITGLKTHSKITLIVRHDNDEIQRFVHLGTGNYNDSTAKLYTDMGMLT
TRPSFGIDATNFFNYLSGYSSKPEWNEISTVPFEIRDSFLKNIDKEIASHKKYGNGHIIA
KMNSLTDKPIIMKLYEASCEGVKIQLIIRGICCLRAGISGVSENITVRSILGRFLEHSRI
FYYYQNGQEEIYLSSADLMTRNMEKRIEIVFPVYEPHIKERIKEVLFVSLEDNQKARVLK
PDGTYKYVSSKSKSKVNSQEVFRKKAQLSSEDS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggacactcgcaacaatttccaaaacccagaatattaccataatagagaatta
agctggctccgctttaatgagagggttcttgaagaagcaattgatacgagtaatccactg
cttgaaaggttgaaattccttgccattttcagttctaacctcgatgaattttttatggtt
agagttgcaggattaatagaccaggtaaaagcaggatataacagaccggaaaataaaaca
gctcttacccctaagcagcagctggaaaaaattgctctgcaaaatcaggagcttgttact
agacagtatacgcactttaaagaaaaactggttcctgaactaaaaaagcacgacatccat
ttcatacgtccaaaagatttatctgataaagattacaagcgtatgcgccgtcattttaaa
gactatatactcccagtcctcactccaatggcgatcgacgcttacagaccatttccgaag
ctgtccaataaaagtataaacctcgccgtcgttctggccagcggaacagaaaaaaaactg
gcaattgttcaggttccttctgttctttcccgaactgtagctgttgagtccggcagttcc
actaaatttatcctgctggaggacctgattactgagtttatagaccgtttgttttcgggt
tttactattatctctgtttctccttttcgaattacgagaaacgcagatttaacgattcac
gaagaaggcgcccgcgatctgctcagggaaattgaaaaagagttaaagaaaagaaaatgg
ggcgctgctgttcgttttgaaatggaaaatgacaatatggataaaaatgttctttctctc
ttaatggacgtacttgaacttcatgaaaacgatatttatagagttaatgggccgttggat
ttcacgtttttgtttaaatttcactctctgcttgcccctgtttttgaaaagctggtttac
gaaacttccattccccagccccccgaagatttgcttcacaaggaaaacataatgggcgcg
atgatggaaaaggatctctttattcatcatccttacgaatctttccagccggtcgtggac
ttgatgtttcaggctgccgaagatgaaaaagttcttgctattaagcagactttgtacaga
gtgagtggagaatctcctatcattgcagctctcgccagagcagcagagctcggtaagcag
gtaacagtattagtagaattaaaagcacgctttgatgaagaaaataatatacagtgggcc
aagcagcttgaaaaagctggatgccatgtcatttacggaataaccggattaaaaacccac
agcaaaatcacccttattgtccgtcacgacaatgatgagatccagaggtttgtgcattta
ggaaccggcaattataatgattcgacggctaaactttatacagatatggggatgctcacc
acccggccgtcattcggaatcgatgcaacaaattttttcaattacttaagcgggtacagc
agtaaaccggaatggaatgaaatttctactgttccatttgaaatcagagattcttttctg
aaaaatattgataaggaaatagcatcccacaaaaagtatggaaatggtcatatcattgct
aaaatgaactcattaactgacaaaccaattattatgaagctttacgaggccagctgtgag
ggtgtgaaaatccaactgattatccgaggcatctgctgtctgcgtgccggtatatccggg
gtcagtgaaaatattactgtcagaagtattctcggaagattccttgaacacagccggata
ttttattactatcaaaacggccaggaagaaatatatttatcgtctgcagacttgatgacg
aggaacatggagaaaagaattgaaatcgtttttcctgtatatgaaccgcatattaaagaa
cggattaaagaagttctctttgtttctctagaggataaccagaaggcgcgtgtcttaaaa
ccggatggcacatataagtatgttagcagtaaatcaaaatcaaaagttaacagccaggaa
gttttccggaaaaaagctcagctttcttccgaagacagctga
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