Anaeromicropila herbilytica: bsdtb5_16510
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Entry
bsdtb5_16510 CDS
T08766
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ahb
Anaeromicropila herbilytica
Pathway
ahb00190
Oxidative phosphorylation
ahb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahb00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
bsdtb5_16510
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bsdtb5_16510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahb03019
]
bsdtb5_16510
Enzymes [BR:
ahb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
bsdtb5_16510
Messenger RNA biogenesis [BR:
ahb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
bsdtb5_16510
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
BCN30356
UniProt:
A0A7R7EK57
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All DBs
Position
complement(1986407..1988542)
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AA seq
711 aa
AA seq
DB search
MANDNKSEFNKPEYFTNRELSWIDFNYRVLGEAKDKSNPLFERLKFLSITASNLDEFFMI
RIASLKDMVNAGYTKKDIAGLNPEQQLKIISEKAHEFVNTQYNTYNRSLLPLLKNQNITI
VPHYENLTDIQSKYVDDYFMNDVYPVLTPMAVDSSRPFPLIRNKTLNIGALIREEKDSEE
YDFATVQVPNVLPRIVPIPSSKDSDITFILLEQIIEKNIHKLFLNYEVICAYPYRIMRNA
DLSIDEDEAADLLKEIQKQLKKRQWGEVIRLDVEDNIDKRLLKILKKELHVKDHDILKMN
GPLDFTFLMKLFSLDGFDHLKHTKYIPQPVKDLNHEEDLFTQIRRKDILLHHPYQTFDPV
VDFVKQAALDPNVLAIKQTLYRVSGNSPIITALADAAENGKQVSVLVELKARFDEENNIN
WAKKLEQSGCHVIYGLLGLKTHSKITLVVRKEDDGIRRYVHLGTGNYNDSTAKLYTDLGL
LTCSKPIGEDATAVFNMLSGYSEPLTWNKLSLAPLWLRDKFLELIHRETEHARNGKKGHI
IAKMNSLCDKSIISALYEASNAGVKIELIIRGICSVKVGIPTISENITVRSIVGNFLEHS
RIFYFLNGGYEEVYLGSSDWMPRNLDKRVEILFPVEAQSLKAEIIDILKIELKDTVKAHV
LTAEDTYEKVDKRGKKALDSQEYFCQKAIKEASTSDDVYNKRVFEPLIHEE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgataataaaagtgaatttaataaacctgaatacttcaccaacagagaactt
agttggattgattttaattatcgtgtcttaggtgaagcaaaagacaaatccaatccactt
tttgaacgattaaaatttttaagcattactgcttctaaccttgatgaattttttatgatt
cgaatcgcctccttaaaggatatggttaatgctggctataccaaaaaagatatcgctggc
cttaatcccgaacaacaattgaaaattatttcagaaaaagcgcatgagtttgtgaatact
caatacaatacctataatcgttctttactacccttattgaaaaatcaaaatatcactata
gtacctcattatgagaatttaactgatatccaaagtaaatatgttgacgactactttatg
aatgatgtctatcctgtgttaacgccaatggccgtagattcctcaagaccttttcctctt
ataagaaataaaactttaaatattggtgccttaattcgtgaagagaaggattccgaagaa
tatgatttcgcaacggttcaagtgcctaatgtattacctagaattgttccaatcccatct
tctaaagattcagatataacatttatattattggaacaaataatagagaaaaatattcat
aaactgttcctaaattatgaagtcatctgtgcctatccttatcgaattatgagaaacgct
gatctctcgattgatgaagatgaggctgctgatttattaaaggagattcaaaaacaactt
aaaaagaggcaatggggtgaagtaatacgactcgatgtcgaagataacattgataaaagg
ttactcaagatattaaaaaaagagcttcatgtgaaagatcacgatattttgaaaatgaac
ggtccacttgattttacttttcttatgaaattattctcccttgatggatttgatcattta
aaacataccaaatatattccccaacctgtcaaagatttaaatcacgaagaagatcttttt
acccaaattcgtagaaaagatattctactccatcatccatatcagacctttgatcctgtt
gtagactttgtaaagcaagctgcattagatccaaatgtgcttgcaattaagcaaacactt
tacagagttagtggcaattcaccaatcatcactgcgttagcagatgctgcagaaaatgga
aagcaggtttctgtattagttgaattaaaagctagatttgatgaagaaaataacatcaac
tgggccaaaaaattagaacaatcaggttgccatgttatctatggattattaggtttaaag
acacacagcaaaataacgctagttgttcggaaagaagacgatgggatccgacgttatgta
catctaggaacaggcaattacaatgattctactgcaaaactatatactgaccttggactt
ctcacctgttctaaaccaattggagaagatgcaactgctgtctttaatatgctctccggt
tattcagaaccccttacctggaataaactctccctagcgcctctatggttacgagataaa
ttcttagaactcattcacagagaaacggaacatgctagaaatggtaaaaagggacatatt
atcgcaaaaatgaactcactatgtgataagtccattattagtgctctctatgaagcttca
aatgcgggtgttaagattgaacttatcattcgaggcatatgttctgtaaaagtgggtatt
cctacaataagtgagaacattacggttcggtcaatagttggaaacttcttagaacattca
aggatcttttattttctaaatggtggatatgaagaagtataccttggtagttctgattgg
atgccaagaaatctcgataagcgtgttgagatactatttcctgtagaggcacaaagttta
aaagcagaaataattgatattctaaagattgagttaaaggataccgtaaaagctcatgta
ttaactgcggaagatacctatgagaaagtagataagagaggtaagaaagccttggattca
caagaatacttctgtcagaaagcaattaaggaagctagtacttcagatgatgtctataat
aagagggtgtttgaaccgttgattcatgaggaatag
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