Aeromonas hydrophila YL17: AI20_12370
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Entry
AI20_12370 CDS
T03186
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ahd
Aeromonas hydrophila YL17
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ahd03009
]
AI20_12370 (rimO)
Enzymes [BR:
ahd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AI20_12370 (rimO)
Ribosome biogenesis [BR:
ahd03009
]
Prokaryotic type
ribosomal protein modification factors
AI20_12370 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AHV35958
LinkDB
All DBs
Position
complement(2616252..2617580)
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AA seq
442 aa
AA seq
DB search
MSNTKQAPKVGFVSLGCPKNLVDSERILTQLRTEGYDVVPSYDDAELVVVNTCGFIDSAV
QESLEAIGEALAENGKVIVTGCLGAKENQIREIHPKVLEITGPHAYEEVLGHVHKYVEKP
THNPFTSLVPAQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKR
LKEAGVKEILVISQDTSAYGVDVKHRTGFYDGMPVKTSMVALCEELAKLGMWVRLHYVYP
YPHVDDVIPLMRDGKVLPYLDIPLQHASPRILKLMKRPGTVERTLERIQKWREICPEITL
RSTFIVGFPGETEEEFQMLLDFIDKAELDRVGCFKYSPVEGAKANELPDPVPAEVQEERF
QRFMELQQQVSIRKLARKVGKEMLVLIDEVDEEGATGRSAADAPEIDGLVYLNGETGLKP
GDMVKVRIDEADEYDLWASLID
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacacaaaacaggcccccaaagtaggattcgtctccttgggttgccccaaaaac
ctggtcgattccgagcgcatcctgacccagctgcgtaccgaagggtacgacgtggtgccc
agctatgacgatgcggagctggtggtggtcaacacctgcggcttcatcgacagcgcggtg
caggagtcgctggaagccatcggcgaggccctggccgaaaacggcaaggtgatcgtcacc
ggctgcctgggcgccaaagagaaccagatccgcgagatccaccctaaggtgctcgagatc
actggcccccacgcctatgaagaggtgctcggccacgtccacaaatacgtagaaaagccg
acccacaaccccttcaccagcctggtgccggcccagggtgtcaagctgaccccccgtcac
tacgcctatctgaagatttccgaaggctgcaaccaccgctgcaccttctgcatcatcccc
tccatgcgcggggatctggtgagccgccccatcggcgaggtactggccgaggccaagcgc
ctgaaagaggccggcgtgaaggagatcctggtgatctcccaggacacctccgcctacggc
gtcgacgtcaagcaccgtaccggcttctacgacggcatgccggtcaagaccagcatggtg
gccctgtgcgaagagctggccaagctcggcatgtgggtgcgcctgcactacgtctacccc
tacccgcacgtggatgacgtcatcccgctgatgcgcgatggcaaggtactgccctacctc
gacatcccgctgcagcacgccagcccgcgcatcctgaaactgatgaagcgcccgggcacc
gtcgagcgcaccctggagcggatccagaagtggcgcgagatctgccccgagataaccctg
cgctccaccttcatcgttggcttccccggcgagaccgaagaagagttccagatgctgctg
gacttcatcgacaaggcggagctggatcgggtcggctgcttcaaatacagcccggtcgag
ggcgccaaggccaacgagctgccggatccggtaccggccgaggtgcaggaagagcgcttc
cagcgcttcatggagctgcaacagcaggtctccatccgcaagctggcccgcaaggtgggc
aaagagatgctggtgctgatcgacgaggtggacgaagagggagccaccggccgctccgcc
gccgatgcccccgagatcgacggcctggtctacctgaacggtgaaaccggcctcaagccc
ggcgacatggtcaaggtccgcatcgacgaagcggacgagtacgacctgtgggccagtctc
atcgactga
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