Arachis hypogaea (peanut): 112754892
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Entry
112754892 CDS
T07294
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112754892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112754892
Enzymes [BR:
ahf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
112754892
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
112754892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
AAA_21
AAA_22
T2SSE
AAA_29
ABC_tran
FtsK_SpoIIIE
ATP_bind_1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
112754892
NCBI-ProteinID:
XP_025658478
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All DBs
Position
Arahy.16:125573911..125576971
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AA seq
433 aa
AA seq
DB search
MAHSGGASSSGVKQQVKLEKESNLRIEVGNDSPLCLRLLNGNAEIFGTELAPEIWLNFPP
RLKFAVFTWYGTTIEMEGTTETDYTADETPMVSYVNVHAILETRRTRDKASSSGDSESSQ
GPRMIVVGPTDSGKSTLLRIFLSWAAKQGSKPTFVDLDIRQGSIMIPGCNAATPIEMHID
PIDGITLEMPLVYFFGHTTPSNNVELYKVLVKELRGMLERQFAGNTKSRASGIVMNTMGW
IEGVGYDLLLHATRTLKANVVLVLGQEKLYNMLIDVLKGEPKVDVVKLQRSGGVLSRNVK
VHQKARTFRIREYFYGLLNDLSPHSNIANFSDLCVYRIGGEPQAPRSALPIGAEPVANPT
RVVPVSINRDLLHMVLAVSFAKEPEEIISSNIAGFIYVTDVDIQRKKITYLVPSAGDLPS
KFLILGSLTWLET
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacagtggtggtgcatcgagctcaggggtgaagcagcaggtgaaattggagaaa
gaaagcaatctccggattgaggttggaaatgattctcctctttgccttcgtcttctcaat
ggaaatgccgagattttcggcactgagcttgcacctgaaatttggctcaacttccctccc
cgactcaaattcgctgtttttacttggtatggtactaccattgaaatggaaggtactact
gaaactgattatactgctgatgagacaccaatggttagctatgttaacgtgcatgctata
ttagaaaccagaagaactcgtgataaagcttcatcctctggtgattctgaatcttctcag
gggcctagaatgattgttgtaggacctactgactccggaaagagtaccttgttgaggatt
tttcttagctgggcggctaagcagggttcgaagcctaccttcgttgacttggatattaga
cagggatctataatgattcctggatgcaatgctgctactccaattgaaatgcacattgac
cctattgatggaattactcttgagatgcctcttgtttacttttttggccatacaactcca
agtaacaatgtagaattgtataaagtgttagtcaaggagcttagggggatgctagagaga
caatttgctggaaataccaaatctcgtgcttcgggcatcgtgatgaataccatggggtgg
atagagggagtaggctatgatttgctattgcatgcaactcgtacacttaaggctaatgtt
gtcttagttttgggtcaggaaaagctgtacaacatgctcatagatgtcctgaagggagag
cccaaagttgatgttgtgaaacttcaaagatctggtggagttttatccaggaatgtgaag
gtccaccagaaggccagaacttttaggataagagagtacttctatggccttcttaatgat
ctctctccacattctaatattgctaattttagtgacttgtgcgtctatcgtattggtggt
gagccacaggctcctcgctcagccttgccaatcggagcagaacctgttgctaacccaaca
agagttgttcctgtgagtataaaccgtgatttgctccacatggtccttgcagtctcattt
gccaaggaacccgaagagatcatttcaagcaacattgctggctttatctatgtaacagat
gttgacattcagagaaagaagataacttaccttgtaccatccgctggagatcttccaagc
aagtttttgatactgggatccttgacatggcttgagacatga
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