Arachis hypogaea (peanut): 112769420
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Entry
112769420 CDS
T07294
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112769420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112769420
Enzymes [BR:
ahf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
112769420
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
112769420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
nSTAND3
CbiA
AAA_22
SRPRB
ATP_bind_1
AAA_24
MMR_HSR1
FtsK_SpoIIIE
ABC_tran
GTP_EFTU
AAA_29
Motif
Other DBs
NCBI-GeneID:
112769420
NCBI-ProteinID:
XP_025669726
LinkDB
All DBs
Position
Arahy.18:complement(38613327..38621807)
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AA seq
435 aa
AA seq
DB search
MAMAHSGGASSSGVKQQVKLEKESELRIEVGNDAPLRLRLLNGNAEIFGTELAPEIWLNF
PPRLKFAVFTWYGATIEMEGTTETDYTADETPMVSYVNVHAILEARRTRAKASSSGDSES
SQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGSKPTFVDLDIGQGSITIPGCIAATPIEMP
IDPVEGITLEMPLVYFFGHTTPSNNVELYKVLVKELGGMLERQFAGNAESRASGMVINTM
GWIEGVGYDLLLHAIRTLKANVVLVLGQEKLYSMLRDVLKGEPKVDVVKLQRSGGVVSRN
VKVRQKARSFRIREYFYGLLNDLSPHSNIANFSDLCVYRIGGGPQAPRSALPIGAEPVAD
PTRVVPVNINRDLLHMVLAVSFAKEPEEIISSNVAGFIYVTDVDIQRKKITYLAPSAGDL
PSKFLILGSLTWLET
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcgcacagtggcggtgcatcgagctcaggggtgaagcagcaggtgaaattg
gagaaagaaagcgagctccggattgaggttggaaacgatgctcctcttcgccttcgtctt
ctcaatggaaacgccgagattttcggcactgagcttgcacccgaaatttggctcaatttc
cctccccgactcaaattcgctgtttttacttggtatggtgctaccattgaaatggaaggt
actaccgaaactgattatactgctgatgagacaccaatggtaagctatgttaacgtgcat
gctatattagaagccagaagaactcgtgctaaagcttcatcctcgggcgattctgaatct
tctcaggggcctagagtgattgttgtaggacctactgactccggaaagagtaccttgtcg
aggatgcttcttagctgggcggctaagcagggttcgaagcctaccttcgttgacttggat
attggacagggatctataacgattcctggatgcattgctgctactccaattgaaatgccc
attgaccctgttgaaggaattactcttgagatgcctcttgtttacttttttggccataca
actccaagtaacaatgtagaattgtataaagtgctagtcaaggaacttggggggatgcta
gagagacaatttgctggaaatgccgaatctcgtgcttcgggcatggtgataaataccatg
gggtggatagagggagtaggctatgatttgctattgcatgcaattcgtacacttaaggcc
aatgttgtcttagttttgggtcaggaaaaactgtacagcatgctcagagatgtcctgaag
ggagagcccaaagttgatgttgtgaaacttcaaaggtctggtggagttgtatccaggaat
gtgaaggtccgccagaaggccagaagttttaggataagagagtacttctatggccttctt
aatgatctctctccacattctaatattgctaattttagtgacttgtgcgtctatcggatt
ggtggtgggccacaggctcctcgctcagccttgccaattggagcagaacctgttgctgac
ccaacaagagttgttcctgtgaatataaaccgtgatttgctccacatggtccttgcagtc
tcatttgccaaggaacctgaagagatcatttcaagcaacgttgctggctttatctacgta
acagatgttgacattcagagaaagaagataacttaccttgcaccatccgctggagatctt
ccaagcaagtttttgatactgggatccttgacatggcttgagacatga
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