Aeromonas hydrophila J-1: V469_15890
Help
Entry
V469_15890 CDS
T03574
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ahj
Aeromonas hydrophila J-1
Brite
KEGG Orthology (KO) [BR:
ahj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ahj03009
]
V469_15890 (rimO)
Enzymes [BR:
ahj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
V469_15890 (rimO)
Ribosome biogenesis [BR:
ahj03009
]
Prokaryotic type
ribosomal protein modification factors
V469_15890 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
DapB_N
Motif
Other DBs
NCBI-ProteinID:
AJE37251
LinkDB
All DBs
Position
3465500..3466828
Genome browser
AA seq
442 aa
AA seq
DB search
MSNTKQAPKVGFVSLGCPKNLVDSERILTQLRTEGYDVVPSYDDAEVVVVNTCGFIDSAV
QESLEAIGEALAENGKVIVTGCLGAKENQIREIHPKVLEITGPHAYEEVLGHVHKYVEKP
THNPFTSLVPAQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKR
LKEAGVKEILVISQDTSAYGVDVKHRTGFYDGMPVKTSMVALCEELAKLGMWVRLHYVYP
YPHVDDVIPLMRDGKVLPYLDIPLQHASPRILKLMKRPGTVERTLERIQKWREICPEITL
RSTFIVGFPGETEEEFQMLLDFIDKAELDRVGCFKYSPVEGAKANELPDPVPEEVQEERF
QRFMELQQQVSIRKLARKVGKEMLVLIDEVDEEGATGRSAADAPEIDGLVYLNGETGLKP
GDMVKVRIDEADEYDLWASLID
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacacaaaacaggcccccaaagtaggattcgtctccttgggttgccccaaaaat
ctggtcgattccgagcgcatcctgacccagctgcgtaccgaagggtacgacgtggtgccc
agctatgacgatgcggaagtggtggtggtcaacacctgcggcttcatcgacagcgcggta
caggagtccctggaagccattggcgaggccctggccgagaacggcaaggtgatcgtcacc
ggctgcctcggtgccaaagagaaccagatccgcgagatccaccccaaggtgctcgagatc
accggtccccacgcctatgaagaggtgctgggccacgtccacaagtacgtcgagaagccg
acccacaaccccttcaccagcctggtaccggctcagggcgtcaagctgaccccccgccac
tacgcctatctgaagatttccgaaggctgcaaccaccgctgcaccttctgcatcatcccc
tccatgcgcggggatctggtgagccgtcccatcggcgaagtgctggccgaggccaagcgc
ctgaaagaggccggtgtgaaagagatcctggtgatctcccaggacacctccgcctacggt
gtcgacgtcaagcaccgcaccggtttctacgacggcatgccggtcaaaacaagcatggtg
gccctgtgcgaagagctggccaagctcggcatgtgggtgcgcctgcactacgtctacccg
tacccgcacgtggatgacgtcatcccgctgatgcgcgacggcaaggtactgccctacctc
gacatcccgctgcaacacgccagcccgcgcatcctcaagctgatgaagcgcccgggcacc
gtcgagcgcaccctggagcggatccagaagtggcgcgagatctgtcccgagatcaccctg
cgctccaccttcatcgtcggcttccccggcgaaaccgaagaagagttccagatgctgctg
gacttcatcgacaaggcggagctggatcgggtcggctgcttcaaatacagcccggtcgaa
ggtgccaaggccaacgagctgccggatccggtgccggaagaggtgcaggaagagcgcttc
cagcgcttcatggagctgcaacagcaggtttccatccgcaagctcgcccgcaaggtcggc
aaggagatgctggtgctgatcgacgaggtggacgaagagggtgccaccggccgctccgcc
gccgatgcccccgaaatcgacggtctggtctacctgaacggtgaaaccggcctcaagccc
ggcgacatggtcaaggtccgcatcgatgaagcggacgagtacgacctgtgggccagtctc
atcgactga
DBGET
integrated database retrieval system
