Actinoalloteichus hymeniacidonis: TL08_10220
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Entry
TL08_10220 CDS
T04472
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ahm
Actinoalloteichus hymeniacidonis
Pathway
ahm03030
DNA replication
ahm03410
Base excision repair
ahm03420
Nucleotide excision repair
ahm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TL08_10220
03410 Base excision repair
TL08_10220
03420 Nucleotide excision repair
TL08_10220
03440 Homologous recombination
TL08_10220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahm03032
]
TL08_10220
03400 DNA repair and recombination proteins [BR:
ahm03400
]
TL08_10220
Enzymes [BR:
ahm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TL08_10220
DNA replication proteins [BR:
ahm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TL08_10220
DNA repair and recombination proteins [BR:
ahm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TL08_10220
NER (nucleotide excision repair)
GGR (global genome repair) factors
TL08_10220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AOS62858
UniProt:
A0AAC9HPC6
LinkDB
All DBs
Position
2192446..2195151
Genome browser
AA seq
901 aa
AA seq
DB search
MSLSDGNSAPGRLLLLDGHSLAYRAFHALPAENFRTTTGQTTNAVYGFTSMVINLLRDET
PTHLAVAFDVSRKTFRSEVYPEYKATRSATPDEFKGQISLIQDVLAVLGIPVLAKEGFEA
DDIIATLTTQAAQQGLRVSICTGDRDALQLVTEAVTVLYPRKGVSDLTRFTPDAVQEKYG
LTPVQYPDYAALRGDPSDNLPGIPGVGEKTAAKWIREYGSLADLVDRVDEVRGKAGEALR
SRLEAVLLNRRLTELDRAVELELAPQDLEVRQWDRDAVHRLFDDLEFRVLRDRLFATLGA
AEPEVEEGLDVHGGLLPSGALAAWLGEHAVAGTRIGLATKGTWARGAGDTEGLALATASG
QGAYIQTVDLTEDDEQALAAWLADPQQPKAAHDAKIVRHVLGARGWRLAGLTSDTALAAY
LVRPGQRSFDLADLVVRYLGRELRLQAEEDSGQLSLLADERADAAAQATDEIVRANAIAL
LADALDGELAGINGSSLLTELELPVLGVLTELEEAGIAVDADRLHGLADHFAAQVKVAAD
AAFGVIGKEINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDAEALQTLFASTEHPFLAHL
LAHRDATRLKSTVDGLIKSIAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEEGRRI
REVFVVGAGHAELMTADYSQIEMRIMAHLSGDEGLIDAFRQGEDLHTYVASRAFDVAADQ
VDAELRRRVKAMSYGLAYGLSVYGLAQQLRISAEESRAQMDAYFARFGAVRDYLHDVVER
ARKDGYTETVLGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKVAMIEVHKGLV
ESGLRSRMLLQVHDELVLEIAEGERDVVEELVRRTMGSAYQLDVPLEVSVGVGRSWDSAA
H
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctgtctgacggtaactccgcacccggccgcctcctgctgctcgacggccactcg
ctggcctaccgggcgttccacgcactacctgcggagaacttccggaccacgaccgggcag
accaccaacgcggtgtacggcttcacctcgatggtgatcaacctgctgcgcgacgagacc
ccgacgcacctcgcggtggccttcgacgtctcgcgcaagaccttccgcagcgaggtctac
cccgagtacaaggcgacccggtcggccaccccggacgagttcaagggccagatcagcctc
attcaggacgtactggccgtcctcggcatcccggtgctggccaaggagggcttcgaagcc
gacgacatcatcgcgacgctgaccacccaggccgcccagcagggtttgcgggtctccatc
tgcaccggcgatcgagatgcgttgcagctggtcaccgaggccgtcaccgtgctgtacccg
cgcaagggcgtctcggacctgacccgtttcaccccggacgccgtccaggagaagtacggc
ctgaccccggtgcagtacccggactacgccgcgctgcgcggcgacccgtccgacaatctc
cccggtatccccggggtcggcgagaagaccgccgcgaagtggatccgcgagtacggctcg
cttgcggacctggtcgaccgggtcgacgaggtccgaggcaaggcgggcgaggcccttcgc
tcgcggttggaggccgtcctgctcaaccgcaggctcaccgaactggatcgagccgtggag
ctggagctggccccgcaggacctggaggtccggcagtgggaccgcgacgccgtgcaccgg
ctgttcgacgatctcgagttccgggtgttgcgtgaccggctcttcgccaccctcggcgct
gcggaaccggaggtcgaggaggggctcgacgtccacggcgggttgctgccctccggggcg
ctggccgcctggttgggtgagcacgccgtggcgggcacccggatcggattggcgacgaag
ggaacctgggcgcgcggcgcgggcgacacggaggggttggccctggccaccgcctcagga
cagggcgcctacatccagaccgtcgacctgaccgaggacgacgaacaggcgctggccgcc
tggctggccgacccgcagcaacccaaggcggcacacgatgccaagatcgtccgccacgtg
ctgggtgcgcgcggatggcgtctcgccggcctgaccagcgacacggccctggcggcctac
ctggtgcggccggggcagcgttccttcgatctcgccgatctggtcgtccggtatctcggc
agagaactgcggctgcaggccgaggaggactccggtcaactctcgttgctcgcggacgag
cgggcggacgcggcggcgcaggccaccgacgagatcgtgcgcgccaatgccatcgcgctc
ttggccgatgccctggacggcgagctcgcgggcatcaacggttcctcgctgctgaccgag
ctggagctgccggtcctcggggtgctcaccgagctggaggaagccgggatcgcggtcgac
gccgaccggctccacggcttggccgatcacttcgccgcccaggtcaaggtcgccgccgac
gccgccttcggtgtgatcggcaaggagatcaacctcggctcgcccaagcagctgcaggtc
gtgctgttcgacgagctggggatgcccaagaccaagcgcaccaagaccgggtacaccacc
gacgccgaggcgctgcagacgctcttcgcctccaccgagcatccgttcctggcgcacctg
ttggcccatcgcgatgccacgagattgaagagcaccgtcgacggcctgatcaagtccatc
gccgccgacggtcggattcacaccaccttcaaccagaccatcgccgcgaccggcaggctc
tcctcgacggaacccaacctgcagaacatcccgatccgcaccgaggagggcaggcggatc
cgcgaggtcttcgtcgtcggtgccgggcatgccgagctgatgaccgccgactacagccag
atcgagatgcggatcatggcgcatctctcgggtgacgaaggcctgatcgacgcattccgg
cagggcgaggacctgcacacctacgtggcctcgcgggccttcgacgtcgctgcggaccag
gtcgacgccgaactgcgcaggcgggtcaaggcgatgtcctacggcttggcgtacggcctc
tcggtgtatggtctggcgcaacagctgcggatctccgccgaggagtcccgtgctcagatg
gatgcctacttcgctcgtttcggcgcggtgcgcgactacctgcacgacgtggtggagcgc
gcccgcaaggacggatacaccgagacggtgttggggcgacgccgttacctgcccgacctg
accagtgacaacaggcagcggcgggagatggccgagcggatggcgctcaacgcgccgatc
cagggcagcgctgcggacatcatcaaggtcgcgatgatcgaggtgcacaagggcctcgtt
gagtccggtctgcgttcgcggatgctgttgcaggtgcacgacgaactcgtcctggagatc
gccgagggcgagcgagacgtggtcgaggaattggttcgccgcacgatgggctcggcctac
caactcgacgtgccgctggaggtctcggtgggtgtcgggcgttcctgggactccgccgcc
cactga
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