Atlantibacter hermannii: NCTC12129_01354
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Entry
NCTC12129_01354 CDS
T05790
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn00300
Lysine biosynthesis
ahn01100
Metabolic pathways
ahn01120
Microbial metabolism in diverse environments
ahn01230
Biosynthesis of amino acids
Module
ahn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC12129_01354 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ahn01002
]
NCTC12129_01354 (dapE)
Enzymes [BR:
ahn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NCTC12129_01354 (dapE)
Peptidases and inhibitors [BR:
ahn01002
]
Metallo peptidases
Family M20
NCTC12129_01354 (dapE)
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M42
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
VDZ72267
UniProt:
A0A447LKK8
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All DBs
Position
1:complement(1262721..1263848)
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AA seq
375 aa
AA seq
DB search
MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLRAIGFTVESMDFGDTQNFWAWRGQGET
LAFAGHTDVVPAGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPN
HKGRLAFLITSDEEASAKNGTVKVVEALMARHERVDYCLVGEPSSTEIVGDVVKNGRRGS
LTCNLTIHGVQGHVAYPHLADNPVHRAAPMLAELVGIEWDQGNAFFPPTSMQVANIKAGT
GSNNVIPGDLFIQFNFRFSTELTDEMIKQRVVEILDRHQLRYSVDWWLSGQPFLTSRGKL
VDAVVKAVAHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQ
LLARMYQRIMEQLVA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcccggtaattgagctgacacagcagcttattcgtcgcccctccttaagcccc
gatgacgcgggctgccaggcgttgcttatcgaacgattgcgcgccattggttttaccgtc
gaatcgatggattttggcgacacccaaaacttctgggcatggcgcggccagggcgaaacg
ctggcgttcgcggggcataccgacgtggtgcctgctggcgatgccgatcgctggatcaat
ccgccctttgagccgaccattcgtgacggcatgctgtttggccgtggcgcggcagacatg
aaaggttcgctggccgcgatggttgtcgcggcggaacgctttgttgcccagcatccgaat
cacaaaggacgtctcgcctttctgattacatctgatgaagaagccagcgctaaaaacggc
accgttaaagtcgttgaagcattaatggcacgccatgagcgtgtggattattgcctggtc
ggggaaccgtcaagtaccgaaattgttggcgacgtggtgaaaaatggccgtcgcgggtcg
ctgacctgtaacctgaccattcatggcgtacagggacatgtggcctatccccatctggcg
gataacccggtgcatcgtgcagcgccgatgcttgcggaactggttggcattgaatgggat
cagggcaatgccttcttcccgcctaccagtatgcaggtcgccaatattaaagcgggcacc
ggcagcaacaacgtcatccctggcgatctgtttattcagttcaatttccgcttcagcact
gagctgactgacgagatgattaaacaacgcgtggttgagatcctggatcgtcatcaactg
cgctatagcgtggactggtggttatcagggcaaccgttcctgacttcccgcgggaaactg
gtcgatgcggtcgtgaaagcggttgcgcactataatgaaattaaaccccaactgttgacc
acaggcggcacctcggacgggcgattcatcgcacgaatgggcgcacaggttgtggagctt
gggccggttaacgccaccattcataaaattaatgagtgcgtgaacgccgccgacctgcaa
ctgctggcccgcatgtatcaacgcattatggagcaactcgtcgcctga
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