Arachis ipaensis: 107612860
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Entry
107612860 CDS
T04301
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
aip
Arachis ipaensis
Pathway
aip03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107612860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107612860
Enzymes [BR:
aip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107612860
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107612860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
107612860
NCBI-ProteinID:
XP_016170106
LinkDB
All DBs
Position
B08:complement(117654863..117669990)
Genome browser
AA seq
1174 aa
AA seq
DB search
MAAKPGSDPDFGALRELFKPHIESFDYMIDTGLETMLSHIKPVEIFDPFTSTKLRVSLSG
AVVDEPSKERISRKMRAPLYPFECRQAGISYTGKFMLDVCFQYNDNPSVVRERVSFGELP
IMLQSKKCKLKGANKEKLVSCKEEASEMGGYFILNGLERVIRLLIMPKRNYPMSMVRNSF
SDRREGYTDKAVVIRCVRADQSSVTVKLYYLRNGSARIGFWMKGREYLLPVGIVLKALID
TTDREIYVNLTSCYNEKYGKGKGTVGTHLVGERAKIILDEVRDLSLFTRLQCLEYIGENF
RPIMTGLENDSYPVVADAVLVDYIFVHLENNFDKFNLLIFMLQKLFSLIDQTSVPDNPDS
LQNQEVLLPGHLITLYLKEKLEDWLQRGKKLVQDEIKEKSKNFDIGNIRQVKNLFEKNPP
RHIGTTIENMLKTGRLNTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRT
TTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSFIDPLGRDYFKIKKDILDVLT
EVGMIPSLPKLVLPGPPELLTVLLDGCIVGGIPSSEVEKVVAHIRRFKVSSAGVIPDHLE
VGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISFPSDGSENIELIGPFEQVFMEIRCPDGG
DGGRKSSFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQHR
ADQKLYHLQTPQSPIVRTGAYTKYCIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER
GMFHGQIYQTETIDLTQMGRKSGKSSQTPRMFRRSNINKFGCTLDADGLPHVGQFIRPDE
PYCSIYNTERSSVQTLRKKGTEPVYVDYVAVDVKNKKDLQKVNIRFRQPRNPIIGDKFSS
RHGQKGVCSQLWPDIDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEF
VDATPFRGSVNKNDGESESKSGSLVDDLGLMLRKKGFNYHGLEVLYSGVYGTELTCEIFI
GPVYYQRLRHMVSDKYQVRSTGTTDQLTKQPIKGRKRGGGVRFGEMERDSLLAHGAAYLL
HDRLHTCSDYHIADVCSLCGSLLTTVFIQPQKRPVRAIGGLPPGRAPKKIMCDACQTSKG
MEAVAMPYVFRYLAAELAAMNIKLTLKLSNQAGA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaaccgggttcggatccggacttcggggcactgcgagagctcttcaagcct
cacatagagtccttcgattacatgattgacaccggcttggaaaccatgctcagccacatc
aagcccgtcgaaattttcgaccctttcacttccacaaagcttagagtctcgttgagtggt
gcggtggtggatgagccttcgaaggagcgaatttcaaggaaaatgcgggctcctttgtat
ccatttgagtgtagacaagctggaatttcttatacagggaagttcatgttggatgtatgc
tttcaatataatgataacccaagtgttgtaagagaacgtgttagttttggagagcttccc
ataatgctacagtcaaagaaatgcaaattgaaaggtgctaataaagaaaagctggtgtcc
tgcaaggaagaggcttcagaaatgggtggttacttcattttgaatggccttgagagagtt
attcgtctattaattatgccaaaacggaactatccaatgagtatggtgcggaattcattt
agtgaccggcgagagggatataccgataaagctgttgtaataaggtgtgtaagagcagat
caatcatcagtaacagtaaaattgtattatcttcgtaatgggagtgcaagaataggattc
tggatgaaaggaagggaatacttgcttcctgtgggcattgttttaaaggccctaattgac
accacagaccgtgaaatttatgtaaatttgacaagctgctataatgagaagtacggaaag
ggaaagggtactgttgggactcaccttgtcggtgaaagggcaaaaataattttagatgaa
gttcgagatttgtcccttttcactcgccttcaatgtctagagtatattggagagaatttc
cggcctattatgactggacttgaaaatgacagctatcctgttgtggctgatgctgtttta
gtggactacatatttgttcatctggagaataattttgacaaattcaatctgctaatcttc
atgttgcagaaacttttctcacttatagatcagacatcagtacctgacaaccctgattcc
ttgcaaaatcaggaggttttactccctggccatctgattacactttatcttaaggaaaaa
ctggaagattggctgcaaagaggaaaaaagcttgttcaagatgagatcaaggaaaaaagc
aagaactttgatatcggcaacattaggcaagtaaaaaatctttttgagaaaaatccacca
aggcatatcggtacaaccattgaaaatatgttgaaaactggaagattaaacacacagacg
ggtctagatctgcagcagagggcaggctatacagttcaggctgaaaggttgaacttctta
cgttttctttcacattttcgtgctgttcatcgaggggcctcatttgctgggctacgtact
acaactgtcaggaagcttttgcctgaatcttggggttttctttgccctgtgcacactcct
gatggagagccctgtggattgttaaaccacatgacatgcacttgcaggattacttcattc
atcgatcctctaggaagagactattttaagataaaaaaagatatcctcgatgttttaact
gaggttggaatgataccatctttgccaaagctagttcttcctggcccacctgaattacta
actgttcttttagatggttgtattgttggtggtataccttccagtgaagttgagaaagtt
gtggctcacataagacgatttaaagtgtcatctgctggagtgattcctgatcatctggaa
gtgggttatgttccattgagcatgggtggagcatatcctggtctatacctgttcacatcc
ccctcaaggtttgttcggccagtgagaaatatatcatttccttcagatggaagtgaaaac
atcgaacttattgggccatttgaacaggtttttatggagataagatgtcctgatggagga
gatggaggaaggaaaagttcattccctgcaactcatgaggaaattcatccaacaggaatg
cttagcgtagtggctaatcttactccttggtcagatcataatcagagcccaagaaatatg
taccagtgtcagatggcaaagcaaacaatggcattctcttcacaagcaattcaacatcgt
gcagatcaaaaattgtatcaccttcagactccccagagtcccattgtgcgcacaggtgca
tataccaagtattgcattgatgaatttccaacaggaacaaatgcaatagttgcagttctg
gcatatacaggatatgatatggaggatgccatgattttaaacaagtcatcagtggaacgt
gggatgtttcacggacaaatatatcagactgaaactattgacctgactcaaatgggtaga
aagtcaggcaagtcaagccaaaccccaagaatgttcagaagaagcaacataaacaaattt
ggttgtacacttgatgcagatggccttccacatgttggccagttcatacgaccggatgaa
ccctactgtagcatttataatacagaaaggagttctgtgcaaaccttaagaaagaagggt
acggaacctgtttatgttgattatgttgctgttgatgtcaaaaacaagaaggatcttcag
aaggtcaacatacggttccgacagcctcggaatcctatcattggtgataaatttagtagt
aggcatgggcaaaaaggtgtttgctctcagttgtggccagacattgatatgccattttgt
ggaactacggggatgcgcccagatctcataatcaatccgcatgcatttccttccagaatg
acaattgcaatgcttttggagtctgttgctgctaagggaggcagcttacatggagaattt
gtagatgcaactccatttcgtggttcagtgaataaaaatgatggggagtctgaatcaaaa
tcaggttcacttgtcgatgaccttggtcttatgctaagaaaaaaaggattcaattatcat
ggtttggaggttctgtatagtggggtttatggaacagaattaacgtgtgagatctttatt
gggcctgtttattaccagcggttacgtcatatggtttcggacaaatatcaggttcgatct
actggaacaactgaccagctcaccaaacagccaatcaaaggacgaaaacgtggtggggga
gttcgatttggagaaatggaacgcgactctctacttgcgcatggggctgcatatcttttg
cacgataggttgcacacctgttctgattatcacattgctgatgtatgttccctttgtggg
agcttgcttacaacagtattcatccaaccccagaagcggccggtgcgggcgatcgggggg
cttccacctggaagagctccaaagaagatcatgtgtgatgcatgccaaacaagtaaaggc
atggaggcagttgcaatgccgtatgtattcagatacttggcagcagagcttgcagccatg
aacataaaattaactcttaagctaagtaatcaagctggagcctga
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integrated database retrieval system
