Anneissia japonica (feather star): 117104763
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Entry
117104763 CDS
T08613
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117104763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajc03021
]
117104763
Enzymes [BR:
ajc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117104763
Transcription machinery [BR:
ajc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117104763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
117104763
NCBI-ProteinID:
XP_033101512
EnsemblRapid:
LOC117104763
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MSGFMHQIPSKRPTNIQFRTYSTNEILGLSVKEIVNPRTFDDLGHATAGGLHDLSLGPSS
DRELCATCCLGYLHCPGHMGHISLPLPVFNPLFFKTIVQLLRGSCLQCHHLLASRWSLVL
ITYQLDCLEKGFIHAVEEMRNIANNFAMDHSGNDPSTVQLLESMLRQHMEELKQKKETEN
CFESVNTNLRNLVAIRKNLLDTFIKDHISSRGRKCNLCGTTVRQIRPEHNVRIITKQQRS
DSSKLEQVFLSPSEARDHLRKLLAYEEKVLKSLFGVLKSNNNVNADNGESAVDLFFLDVI
PVVPTKFRPISSAGEKRFENPQTAGLTKVLRDSQTLAQLLFFNQNEHNEALLKDFDKSIL
ASVPGKSNTEKLQNAWSMLQTRVNCLVDSDMDKLSTDNLPGVKQILEKKEGLFRKHMMGK
RVNYAARSVISPDPFINSDEIGIPDIIAKKLTYPQPVTEWNAQELRRAIMNGPNKHPGAL
LIENEDGTQMKLKADNKTQREAIAKQLLTPQNPRHAVTGQKRVHRHIKNGDVLLLNRQPT
LHKPSIMAHKVRILPREKTFRLHYSACKTYNADFDGDEMNAHFPQNEIGRSEAYNIAITS
QQYLVPKDGTPLGGLIQDHMIAGVKMTVRGRFYTRDQYQQLIFNAMTDKRGHVKLLPPAI
IKPKELWSGKQVFSTLLLNVIPEDKPLFNFIGRSKIASKTWQREDPRVPRGGGGTPLKGD
NMTESQVVFRQGELLVGVLDKANYGSTQYGLVHACYELYGGQTAVLILSCLGRLFTTFLQ
YIAGFSLGVEDILVKPKADKKRRKSMRKANKSGLGIMAKTLQVDDPSDVEAINDKYETAH
RSSDGLQMAEIDMQMKTNTDTFTNEVSKICLGQGLIKSFPDNNLQLMVQSGAKGSMVNCM
QISCMLGQIELEGRRPPLMLSGRSLPSFQPYESCPRSGGYVDGRFLTGIRPQEYFFHCMA
GREGLVDTAVKTSRSGYLQRCIIKHLEGLLVNYDLTVSHKSIYVIILDQSLTCKIGIVED
RHCDNDEFNLNQEANDQSETNRKEDGGESDEEGDGDAADRKYQGQRDEEKEYDEEDENVD
SVFFLQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILIVASANIKTPSMDVPFHGR
RYAHKRAARLRKKLMRVHLSQVIEDVDIYESYNIRNNWDQNRIYKVRFNFLPQKEYEEDC
YATPTSVLHFFEKTFVKQLTETLKRKCKELKRTREVNFRSVGSKFAMEDAAVGEAGNQNS
QSEEPTGTGDNDEFNLNQEANDQSETNKKEDGGESDEEGDGDAADRKYQGQRDEEKEYDE
EDENVDSGNEDAFVDSEVSERSGSDETDEFMSDTVMRKKMLNSNRKVTTEEKDARINAVL
CTSTQVSNYKFDTVDSLWCELVLQFELQDSKLDLGTIILTEAQKAVVYETAGISRCFIQD
SDGEKRLKTEGVNFRELFKYDKLLDLNKLYSNDIHAVARTYGIEAACRVIVKEMRDVFKV
YGITVDPRHLSLIADYMTFEGVYKPFNRTGLETNASPLQKMTFESTMHFLKEATMHGVSD
QLKSPSARLVVGRVVAGGTGCFDLLQQLV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtttcatgcatcaaatcccatcaaagaggcctaccaatattcagtttcgtacc
tacagtaccaatgaaatacttgggttgagtgttaaagaaattgtgaacccaaggacattt
gatgacctaggtcatgcaactgctggtggtcttcatgacctttctctaggccctagtagt
gatagagagttatgtgcaacatgttgccttggttaccttcattgcccaggccacatgggt
catatcagtcttccactaccagtttttaatccactgttttttaaaacaattgtacaacta
ttgcgaggatcgtgcttacaatgccatcatctgctagcgagtcgctggtccctggtcctg
atcacctaccagctggattgccttgagaaaggcttcattcatgctgttgaggaaatgcgc
aacatagccaacaacttcgcaatggatcacagtggcaatgaccctagcactgtacaactt
cttgagtcaatgttgaggcagcacatggaagaactgaaacagaaaaaagaaacagaaaat
tgctttgaatcagtgaatacaaatctgcggaatcttgtagcaatacggaagaatcttctg
gacacatttattaaagaccacattagttcacgcggccgaaagtgcaatctctgtggcaca
acagtacgccagattcgaccagaacacaatgtgcgcatcatcacaaagcagcagagatct
gatagtagcaagttggaacaagttttcctgtccccttctgaagccagggatcatctcaga
aaattattggcttatgaagaaaaagttttaaaaagtttatttggtgtcctgaagagtaat
aataatgtaaatgcagacaatggtgagagtgctgtggacttattttttcttgatgtcatt
ccagttgtaccaacaaaattcagaccgatatcttctgctggggaaaagcgttttgaaaat
ccacaaacagctggtctgactaaagtattgagggatagtcaaaccctagcacagctgctc
ttctttaatcagaatgagcacaatgaagccctactgaaggactttgataagagcatattg
gcatctgtgcctggaaagagcaatacagagaaactacagaatgcttggagtatgctgcaa
accagagtgaactgtctagttgatagcgatatggataaactatcaactgataatttacca
ggagttaaacagatccttgagaagaaagaaggactatttcgcaagcatatgatggggaag
cgtgtcaactatgccgcacgctctgtcatctcaccggatcctttcataaactctgatgaa
atcggcataccagatatcattgctaagaagttaacatatccgcagcctgtgacagaatgg
aacgctcaagagttgcgtcgcgccatcatgaatggacccaacaaacatccaggagcattg
ttgattgaaaatgaagatggtactcagatgaaactaaaagcagacaacaagactcagcga
gaagccattgcaaagcagcttcttacaccacaaaatccgcgacatgcagttacaggacag
aaacgagttcatagacacatcaagaatggggacgtgctgctgctgaatcgacaaccgacg
ttgcataagccgagtatcatggcgcacaaggtacgtatattgccacgggaaaagacattc
cgacttcattattctgcatgcaagacttacaatgctgattttgatggcgacgagatgaat
gcgcattttcctcaaaatgagattggacgttctgaggcatataacattgctatcaccagt
cagcagtacttagttccaaaggatggcacgccactcggtggtctcatccaagatcacatg
attgcaggagtaaaaatgactgttagagggcgcttttacacaagagaccagtaccagcaa
ttgattttcaatgccatgactgacaagaggggtcatgtgaaattgcttccaccagcgatc
ataaaaccaaaagaactttggtctggcaaacaagtattctccacgctcctcctcaatgtc
atccctgaagacaagccattgttcaactttatagggcgctctaagattgctagtaagacg
tggcaaagggaagatcctcgtgtgccgagaggagggggaggtacgccactgaaaggggat
aacatgacagaatctcaggttgttttcaggcagggtgagcttctggtgggtgtgttagac
aaagcaaactatggtagtactcaatacgggctcgtgcatgcctgctacgagttgtatggt
ggtcagacggcagttcttattcttagctgtcttggtcgcttatttactacatttctacag
tacattgctgggttcagtctaggtgttgaggacattcttgtaaaaccaaaggctgataaa
aaaagaaggaaatcgatgagaaaagctaataaatctggtttgggaataatggcaaaaact
cttcaagttgatgacccaagtgatgttgaagccatcaatgacaagtatgaaacagcccac
aggtcatcagatggattacaaatggcagagattgatatgcaaatgaaaacaaacactgac
acattcacaaatgaagtttccaaaatctgtttgggtcaaggattaattaagagtttccca
gacaacaacttacaactgatggtgcagtctggagcaaaaggttcaatggtcaactgtatg
cagatttcttgtatgcttgggcaaattgagctagaaggaagacgaccacccctcatgcta
agtggaaggtcactgccgtcattccaaccctatgaatcatgtccacggtctgggggatat
gtagatggtcgttttctaactggcattcggccgcaggagtattttttccattgcatggct
ggaagagaaggtctggtggatacagccgttaaaaccagtcgtagtggatatctacagcgt
tgcattataaagcatttggaggggctgcttgtgaattatgaccttacagtaagtcataag
tcaatttatgtaatcatacttgatcaatcgcttacttgcaagataggcatcgtagaagat
aggcattgtgacaatgacgagttcaatttaaatcaggaagcaaatgaccaatcagagaca
aataggaaggaagatggtggagagagcgatgaagaaggagatggtgatgcagcagatagg
aagtaccaaggacagagagatgaggagaaggaatatgatgaagaggatgaaaatgttgac
tcagtgttttttttgcagtcaattggtgaaccttcaacacagatgacattgaacactttc
cattttgctggtaggggtgaaatgaatgttactcttggtattccaagattaagagagatt
ttgattgtagcaagtgccaacatcaagactccctcaatggatgttccattccacggtcgg
cgctatgcacacaaacgagcagcaagactacgcaagaagcttatgcgtgttcacctctct
caggtcattgaagatgttgatatttatgaaagctacaacattaggaataattgggaccag
aatcgtatttacaaggttcgctttaattttctgccccaaaaggaatacgaggaggattgc
tatgctactcctacatcagtgctgcatttttttgagaagacatttgtgaaacagctgaca
gaaacccttaaaaggaagtgtaaggagttgaaaagaacaagagaagttaactttagatca
gtggggtcaaagtttgctatggaggatgctgctgttggagaagcaggcaatcagaacagc
caatcagaggagcccactggaacaggtgacaatgacgagttcaatttaaatcaggaagca
aatgaccaatcagagacaaataagaaggaagatggtggagagagcgacgaagaaggagat
ggtgatgcagcagataggaagtaccaaggacagagagatgaggagaaggaatatgatgaa
gaggatgaaaatgttgactcaggtaacgaggatgcctttgttgattcagaggtcagcgaa
aggtcaggttctgatgagaccgatgagtttatgagtgatacggtgatgaggaagaaaatg
ctgaattccaaccgcaaagtcaccacagaagaaaaggatgcaagaattaatgctgtattg
tgtacttcgacacaggtttccaactataagtttgatactgttgatagcttatggtgtgaa
ctagtactacagtttgagctgcaagacagtaaattagaccttggcactatcatactgact
gaagcccagaaagcagtagtgtacgagacagctggtatatcccgatgttttatccaagac
agtgatggtgaaaaaagactgaaaacagaaggagttaattttagagagctattcaagtat
gataagttattggatctgaataaactctactccaatgatatccatgccgtggccaggaca
tacggtatagaagctgcatgcagagtcattgtaaaggaaatgcgagatgtctttaaagtg
tatggtatcacggttgacccccgccatctttcattgattgctgattacatgacatttgag
ggagtctacaaaccctttaataggactggactggagactaatgcatcacctctacaaaag
atgacatttgagagtacaatgcatttcttgaaagaggctacaatgcacggagtgtctgat
cagctgaagtcaccgtctgccagacttgtcgttgggagagtggtagctggcggtactggc
tgttttgacttactacaacagttggtgtga
DBGET
integrated database retrieval system
