KEGG   Anneissia japonica (feather star): 117110389
Entry
117110389         CDS       T08613                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
ajc  Anneissia japonica (feather star)
Pathway
ajc03020  RNA polymerase
ajc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ajc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117110389
  09124 Replication and repair
   03420 Nucleotide excision repair
    117110389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ajc03021]
    117110389
   03400 DNA repair and recombination proteins [BR:ajc03400]
    117110389
Transcription machinery [BR:ajc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117110389
DNA repair and recombination proteins [BR:ajc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117110389
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom Ogr_Delta DUF5886 DZR Lar_restr_allev
Other DBs
NCBI-GeneID: 117110389
NCBI-ProteinID: XP_033108979
EnsemblRapid: LOC117110389
LinkDB
Position
Unknown
AA seq 133 aa
MDIFSSDFQENKKSGGPGFVGIKFCQECNNMLYPKEDKEHRILLYACRNCDYQQESDNSC
VYVNKITHEIDELTQIVAEVKDDPTLPRTEDHPCPQCGHRQAVFFQSQTTRGEEGMRLYY
VCTAPDCKHRWTE
NT seq 402 nt   +upstreamnt  +downstreamnt
atggatatctttagctctgactttcaagaaaataagaagagcggtggcccaggttttgtt
ggtattaaattttgtcaggaatgtaataatatgttgtatccaaaagaagataaagaacac
agaattcttctctacgcatgtaggaattgcgactaccaacaggaatcagataactcttgt
gtctatgttaacaagataacacatgaaattgatgaattaacacaaattgtagcagaggtg
aaagatgacccaacattgccaaggacagaagaccatccttgtccacaatgtggtcacaga
caggcagtgttctttcagtctcaaacaactagaggagaggaaggaatgcgtctttattac
gtttgtactgcacccgactgtaaacatagatggacagaatga

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