Anneissia japonica (feather star): 117125334
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Entry
117125334 CDS
T08613
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1-like
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117125334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117125334
Enzymes [BR:
ajc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
117125334
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
117125334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
ATP_bind_1
nSTAND3
AAA_18
TniB
AAA_14
Motif
Other DBs
NCBI-GeneID:
117125334
NCBI-ProteinID:
XP_033127694
EnsemblRapid:
LOC117125334
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MEGTSQLPPEEKGVREFRLEKDNELRFEVEHDAEVQMELKEGLAEVFGTELLRNNVYRFT
AGAKVAVFTWHGCLVHLRGKTEAAYVSKDTPMLMYLNTHAALEQMRNQAELDGTRGPRVM
IVGPQDVGKSTVCKLLLNYAIRVGRQPTYVELDVGQGTISVPGTVGALLVERPSDVEEGF
PLAAPLVYHFGVTTPGANLKLYNLLTSQIAEMLNMRCKVNPIASVSGCIINTCGWVKGDG
YKCITHAAQAFEVDVIVVLDQERLYNELVRDMPSFVKVVLQPKSGGAVDRSQTFRRTTRD
DKVREYFYGFRNCFYPHSFDVAFHSVEIYKIGAPAVPNSCLPIGMTPEDNQTKLVPVQPS
QNLVHHILSLSSAKTREDDLVTANVVGFICITNVDMERGSFTVLSPAPRPLPQRYLLLSD
VRFMDIK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtacttctcagttaccacctgaagaaaagggtgtgagggaatttcgtctggaa
aaagataatgaacttcgctttgaagtggaacatgatgctgaagtacagatggagttgaag
gaaggcctggctgaggtgtttggtacagaactactccgaaacaatgtgtacaggtttacc
gctggagccaaagtagccgtgtttacttggcatggatgtttagtacatctcaggggaaag
acagaagcagcctacgtatctaaggacacgccaatgcttatgtatcttaacacccatgct
gcacttgaacaaatgaggaaccaggcagaacttgatggaacaagaggtcctagagtcatg
attgttgggcctcaagatgttggcaagagtactgtttgcaagctgttgcttaactacgcc
attagagttggtaggcagcccacttacgtagaacttgacgttggacaggggactatatca
gtgcctggcacggttggtgcacttcttgttgaacggccatctgatgttgaagagggcttc
ccactggcggcacctttagtctatcactttggagtaacaacaccgggagctaacctcaaa
ctatataacctcctcacatcgcaaattgccgagatgctgaacatgcgatgcaaggtcaat
cctatagcttctgtaagtggatgtataatcaacacgtgtggatgggtaaaaggtgatggg
tataagtgcattacacacgcagcacaagcctttgaagttgatgtaattgtagttttggac
caggagagattgtacaatgaactagtaagagatatgccatcatttgtaaaagtagtcctt
caacctaaatctggaggggctgtagacaggtcgcaaacattccgaagaacaaccagagat
gataaagttagagaatatttttatggattccgaaattgtttctatcctcactcattcgat
gtagcattccattctgttgaaatttataaaataggagctcctgctgtaccaaattcttgt
cttccaattgggatgaccccagaagataaccagaccaaacttgtacctgttcagccaagt
caaaatttagtgcatcacattcttagcttaagctcagcaaagacacgggaagatgacctg
gtcactgccaatgtagtggggtttatttgcataacaaatgttgacatggaaaggggatca
ttcactgttctgtcacctgcacctagacctttacctcagcggtacttgttgcttagtgat
gtccgattcatggatattaaatga
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