Histoplasma mississippiense: HCAG_06242
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Entry
HCAG_06242 CDS
T02229
Name
(RefSeq) similar to DNA mismatch repair protein 6
KO
K08737
DNA mismatch repair protein MSH6
Organism
aje
Histoplasma mississippiense
Pathway
aje03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HCAG_06242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aje03400
]
HCAG_06242
DNA repair and recombination proteins [BR:
aje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HCAG_06242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_23
AAA_27
Glyco_hydro_99
AAA_21
AAA_29
DUF5740
Filament
Motif
Other DBs
NCBI-GeneID:
5444997
NCBI-ProteinID:
XP_001538637
LinkDB
All DBs
AA seq
1188 aa
AA seq
DB search
MAEDSGQQKTPDARILKKSTPSTQNMKSQKSILGFFQKSSPSASAASPACRNDASQEPVS
SPAQRAASNQKSHKKPEPKLPRSLNTRRNKTVTSSGQSITRVPSSDATGYCEQDAEVEVS
TAVNGDGKTEASTESAADGGLVPCPSHLLTDLRYRLTMKELIEALSQLLVGTSSRRSLKR
RKTAAGSSDEDEFKNDTEFSDDDLDNFVVPDDSEDEVKPSKKRKRPSNTAVKISSSKPSP
IRDEEFDFELPDVSGGSALKWTYDPNDTEPRKPRPAVVRNIAPGEKKKAKAHMSEPEQRY
PWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGKF
YELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALG
KEMREKQDKSNGTPVKQDKIIRRELSCVLTSGTLVDGSMLQDDMSTYCVAIKEALVNDLP
AFGIAFVDTATGQFYLAEFIDDADMTKFETFVAQTRPQELLLEKSVMSTKALRILKNNTG
PTTLWNYLKPCKEFCEADVTVRELDASNYFVSEEGDNIAAWPEALRQARDKEFVMSAFGA
LVQYLRMLKIERDLITIGNFTWYDPIKKATSLVLDGQTLINLEIFANSFDGGQEGTLFHL
LNRCITPFGKRLFKQWVCHPLMDTRKINARLDAVDALNADSSVQNQFSSQLTKMPDLERL
ISRVHAGRCKAQDFLHVLEGFEKIDYTMGLLKEIGSGEGAIGQLVASMPDLSGYLQYWKT
AFDRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDQLLKEVRKKLGSNAIVYRDNGK
EIYQLEVPIKIKNVPKDWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQIVKEVASRF
YARFDENYSTWLAAVRTIAQLDCLISLAKASSALGYPSCRPVFVDDERSVLEFEELRHPC
MLPNVGDFIPNDVKLGGNTPNLNLLTGANAAGKSTILRMTCTAVIMAQIGCYVPCQSARL
TPVDRIMSRLGANDNIFASQSTFFVELSETKKILFEATPRSLVILDELGRGTSSYDGVAV
AQAVLHHVATHIGALGFFATHYHSLASEFEGHPEIAPRRMRIHVDEEERRVTFLYKLEEG
IAEGSFGMHCASMCGIPNKVVERAEIAAKQWEHTSRLKESVKRRKEVG
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggacagtgggcagcaaaaaacgccagatgctcgtatccttaagaagtcaact
ccaagcacacagaatatgaaaagccaaaagtcaattctgggcttcttccaaaaatcttcc
ccgtcagcttctgccgcttctcctgcttgccggaacgatgctagccaggagccagtgtct
tcacctgctcagcgagcggcctcaaatcaaaaatcccacaagaagcctgaaccaaaatta
ccaagatcattgaatactagacgaaataaaactgtaaccagcagtgggcagagcataacc
cgagttccaagtagcgatgcaaccggatattgcgaacaggatgccgaggtggaggtttcc
accgcagtaaatggtgatgggaagacggaggcaagtactgagagtgcggccgatggtggt
ctagtgccttgcccatcacacctgctaacagacttacggtacagattgacgatgaaggag
ctgatcgaagctctgtcacagctactcgtcggaacatctagccgaagatcccttaagagg
agaaaaacagctgcagggtcaagcgacgaagacgaattcaagaatgataccgagttttct
gatgatgacttggacaatttcgttgtcccagatgactccgaggacgaagtgaaaccgtca
aaaaaacgcaagcggccctcaaacactgctgtcaaaatatcttcgtcaaaaccatcccca
atacgagatgaggagtttgactttgaacttccagatgttagtggtggttctgccctaaag
tggacttacgatcccaatgatacggagccacggaagccacgacctgctgttgtcaggaac
attgcaccaggagagaagaaaaaagcgaaggcgcatatgagtgaaccagagcaacggtat
ccctggcttgctaatatcactgatattgaccgaaatccccctggccatcccgactatgac
ccccggaccatttacatccctcctcttgcgtggaccaaattctcaccttttgaaaagcag
tactgggaaatcaagcaaaagttttgggacaccatcgtctttttcaagaagggtaaattt
tacgagctttacgaaaatgatgctactattgggcatcaactgtttgatctgaaactcacg
gaccgtgtgaatatgcgaatggttggcgttcctgaaatgagcttggatcattgggccaat
caatttgttgccaagggcttcaagatcgcgcgggtagatcaaagcgagtccgccttgggt
aaagaaatgcgagagaagcaagataaatccaatggcacaccagtgaagcaggacaaaatt
atcagacgtgaattgtcttgtgtcttgacttccggcactcttgtagatgggtcaatgctt
caagatgatatgtcaacatattgcgtggctatcaaggaggcgttagtcaacgacctcccg
gcattcggtattgcttttgttgatactgccaccggccagttctatttagcagagttcatt
gatgatgccgatatgacaaagtttgagacgtttgttgcccaaacccgaccccaagaatta
ctgctcgagaagtctgtcatgtctaccaaggctttgcggatcctgaaaaataacactgga
ccaactaccctctggaattatttaaaaccctgcaaggagttctgtgaagccgatgttact
gtccgggagcttgatgccagtaattattttgtttcggaagagggtgacaatatcgcggca
tggccagaagcactacgacaggcacgggacaaagaattcgtcatgtcagcatttggggcg
ctagtgcaatacttacggatgctgaaaattgaaagagatttgatcacaatcggaaatttc
acttggtatgacccgatcaaaaaggcaaccagtcttgtcctggatggtcaaactttgata
aaccttgagatattcgccaattcatttgacgggggccaagaaggaacactcttccacctc
ttgaatcgatgcattacgcctttcggtaaaagactattcaaacaatgggtttgccaccca
ttgatggatactaggaaaatcaatgcgcgacttgatgccgttgatgccttgaacgcagat
agcagcgtccagaaccaattttcatctcagctaacaaaaatgcctgatctcgagagactt
atttctcgggtccatgctggaagatgcaaagctcaggatttcctccatgttcttgaagga
ttcgagaaaatcgattacacaatgggcctcctaaaggaaatcggttccggggagggagcc
attggacaattagttgcttcaatgcctgatttgagtggttacttgcagtactggaaaact
gctttcgatcgtaccaaagctaaggactccggtattcttgttcctgaagctggtgtcgaa
gaagactttgatgcttcacatgataggatttctgaaatagaaagtgatctggatcaactt
ctgaaggaagttagaaagaagctgggttccaatgccatcgtttatcgggataacggaaaa
gaaatttatcaacttgaagtaccaatcaaaattaaaaacgtcccaaaggactgggaccaa
atgtccgcgaccaagcaggcgaaacgcttctatttccctgagctacgcagcttaattcgc
cagcttcaggaagcacaagaaactcatagccagattgtcaaagaggttgcgagtcggttt
tatgctcgattcgacgagaattattcgacctggctagcagctgtgagaaccattgcgcaa
cttgattgtttgattagtttagcaaaagcctcatcagctttaggatacccaagctgtcgc
ccagtgtttgtggatgatgaacggagcgtcctagagttcgaagaacttagacatccatgt
atgttgccaaacgtgggcgactttatccccaatgatgtaaagctaggaggaaacacccca
aatctcaacttgctcactggtgctaacgctgctgggaaatccactatattacgcatgaca
tgtacagctgtaatcatggcacaaattggctgctacgttccctgtcaatctgctcgccta
acacctgttgatcgtatcatgtcccgtctcggcgccaatgacaatattttcgcgtcacag
tctactttttttgttgagctctcagaaactaaaaagattttattcgaagccacgcctcgc
tcccttgttattctggatgaattagggcgcgggacaagttcgtatgacggcgttgcggtg
gcccaggcagtgctccaccatgttgctacccacattggcgccctcggtttcttcgcaact
cattaccactccctcgcttctgaatttgaagggcatccagaaatagctccgcgacgaatg
cgcatccatgtggacgaagaagagagacgagttacattcctatacaagcttgaagagggc
attgcagaagggagcttcggcatgcactgtgcttccatgtgcggcattccgaacaaagta
gttgagcgtgcagaaattgccgccaagcaatgggaacatacaagccgtttgaaagaaagc
gttaagcgtaggaaggaggtgggctaa
DBGET
integrated database retrieval system