Histoplasma mississippiense: HCAG_08895
Help
Entry
HCAG_08895 CDS
T02229
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
aje
Histoplasma mississippiense
Pathway
aje03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HCAG_08895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_08895
Enzymes [BR:
aje01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HCAG_08895
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
HCAG_08895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
5442500
NCBI-ProteinID:
XP_001536231
LinkDB
All DBs
AA seq
1439 aa
AA seq
DB search
MQSAEAVQIDLGKSQVVDRVPKVIKEIKFGVLSTQDIVSQAVVEVSDRKLFDLDNDRAVA
PHGPLDGRMGISSKSGTCDTCGGALQVCSGHFGHVKLVLPAFHVGYFKRVISILQEICKE
CSHILLPETERRAFLRELRRPGIDNLRRMQIAKKINERCRKTRTCYKCNAVNGVVKKAGT
SALKITHEKFRAFNASTSVKKIPPPSKVVFDKSFEEAKKSNPDIDKHFKKAHDDLHPLRV
LRLFRSVSNEDCELLSLNPEEARPEVFLWQYVPAPPVCIRPSVGQEAASTEDDLTAKLGD
IIQSNINLKNALIKGAPVQTIIECWDYMQLQLAVYINSDVPGLQKADFGKPIRGFCQRLK
GKQGRFRGNLSGKRVDFSGRTVISPDPNLRVNEVAVPQLVAMNMTYPEQVTRYNKEKLRQ
RIRNGTKTWPGANYVLKKSQNFKMNLKFGNPNLVANELEEGDIVERHIEDGDIVLFNRQP
SLHKLSILSHFAKVRPHRTFRLNECVCNPYNADFDGDEMNLHVPQTEEARAEAMELMGVK
HNLATPKNGEPIISAIQDFITAAYLLSSKDVFYDRKTFTHICLYMLESDTRFDLPPPSVL
KPQILWTGKQVFNVLMRPNKQSPVLINLDAACREFKAPKGTPRDLDANDGWLCIRNSEIM
CGVMDKSTIGSGKKDSVFYVMLRDFGPDVASEGMNRLSRLSARWLTNLGFSIGITDVYPG
EKLLEEKHHIVEHAYAQCDEVIQLFKNGKLEKAPGCDEQMTMENAISGLLSKVRQQAGEI
CIAELSRWNSPLIMATSGSKGSDINVAQMVALVGQQIIGNQRVQDGFQDRTLPHFPKYAR
QPPAKGFVRNSFFSGLTPTEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSTRY
DDTVRNSSSNIVQFQYGDDKLDPVDMEGRAKPVHFDRTFTHAEVTTFDNSDKGLLPDEII
TLCQNLLAPERAKLARFDLSGKKLEYNDRSDHGIDQLESARDFLQSIEDYRGKGVIHTAK
VSTRALTSFITACLTKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ
GVPRIKEIINASKEISTPVITCELVNKQDLRAAQIVKGRVEKTFVRDIIYYIEEDWTGNE
AYINIKIDFSTIQNLQLELTLQDILMAIKKHKRFKSADLKFRSFGSHIHIFVDQQTARTA
LSKAEEAATGADPYIRLKHLKRLIPNIQVIGHSQCARAIIRTDETNTTNTLLVEGYGLRD
CMTTDGINGRHTRTNNIMETRAVLGIEAARTTIVDEIGEVMKDMAIDPRHMQLLADVMTY
KGEVLGITRFGLAKMRDSVLQLASFEKTADHLFDAGGAGRTDLIEGVSECIIVGKSVSLG
TGAMEVVRALNFYEGQIGRRKTAFEDAWEEICEARGCSTGVEGKGVVPRVMKKRRKEAV
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctgcagaggctgtacaaatcgacctggggaaatcccaggtcgtggatcgcgtg
cctaaggtcatcaaggagataaaattcggcgtcctctcgacccaagatatcgtgagtcaa
gccgtcgttgaggtttctgataggaagctcttcgatctcgacaatgaccgcgctgtcgcc
ccccatggcccgctcgacgggcgcatgggaatatcgagtaaatcgggtacttgcgacacc
tgcggcggagcactacaggtctgtagcggacatttcgggcatgtaaagctggttcttccg
gctttccatgtgggttattttaaacgggttattagcattttgcaggagatttgcaaggaa
tgctcacacatactccttcccgaaaccgagcgcagggcgtttcttagagaattaagacgg
cctggtatagataacctcaggcgcatgcagattgcgaagaagatcaacgagcgatgtcga
aaaacgcggacctgctacaaatgcaacgcagtcaatggtgtggtgaagaaagccggaaca
agcgcactgaaaatcactcatgagaaattccgagccttcaacgcgtccacgtctgtgaag
aaaattcccccgcccagcaaagttgtcttcgacaagtcattcgaagaagccaagaaaagc
aatccggatatcgacaaacatttcaaaaaggcccacgacgatctacatccactgcgcgtg
ctgagactgtttcggtccgtttctaacgaagactgcgagctccttagcctgaatcccgag
gaggctcggccagaagtgtttctctggcaatacgttccggctccgcctgtgtgcattcgt
ccatcggttggacaggaggcggctagtaccgaagatgacttgacagcaaaactgggagat
atcatccaaagcaatatcaatctcaaaaatgcactcatcaagggtgcaccggtacagacc
attatcgaatgctgggactatatgcagctgcagctcgcagtgtatatcaacagtgatgtg
ccgggtttacagaaggctgattttggaaagcctattcggggcttctgccaacgactcaaa
gggaaacaggggcgattccgtggaaatctttcagggaaacgagtggatttctctggtaga
accgttatttctccagacccgaatctgcgtgtcaacgaggttgctgttcctcagcttgtt
gccatgaacatgacttatcccgaacaggtgacaagatataataaagaaaaactccgtcaa
cgcattcgaaatggcacaaagacttggccgggagcaaattacgtcttaaagaaaagtcag
aattttaaaatgaacttgaaatttggtaaccccaacctggttgcgaacgagttggaggaa
ggggatattgttgagcggcatattgaagatggagacatcgttctcttcaaccgacaaccg
tccctccacaaactcagtattctttcccattttgccaaggttaggcctcaccgaacattc
cgtctgaatgagtgtgtatgtaacccatacaatgccgattttgatggcgatgaaatgaat
ctacatgtccctcaaacggaagaagcgagggccgaagcgatggaattgatgggagttaaa
cataatctggctacaccaaaaaacggcgaacccatcatttccgctattcaggatttcatc
actgctgcttacttgctgagtagtaaagatgttttctatgatcgcaaaactttcacacac
atctgcctctacatgcttgaatccgatacccgttttgaccttccgccgccctcagtacta
aaaccccaaatattgtggacagggaaacaagtcttcaacgtgttgatgcgacccaataag
caatctccggttttaattaatttagacgcagcatgtcgagaattcaaagcgccgaaagga
actcctcgtgacttggatgctaatgatggatggctttgcattcgtaactccgaaatcatg
tgtggtgtcatggataagtctaccatcggatccggcaagaaagactcggtattttatgtt
atgcttcgagatttcggccctgatgtcgcatctgaaggcatgaaccggctctcaaggctg
tccgctagatggctcaccaacctaggtttctcgatcggtataacagacgtataccctggt
gaaaaacttttagaggagaaacaccatatagtagaacatgcttacgcgcagtgtgatgaa
gttattcaactatttaaaaacgggaagcttgagaaggctccaggctgcgacgagcagatg
acaatggaaaatgcgatatccggtttactcagtaaagttcggcagcaagccggagagatc
tgtatcgcggaactgagtagatggaactctcccctgatcatggccacttcagggtccaag
ggttcggatattaacgtcgctcagatggttgcccttgtcggtcaacaaattatagggaat
caacgggttcaggacggctttcaagatcgaacgttacctcatttccccaagtatgctcgc
caacctcccgcgaaaggtttcgtgcggaacagtttcttttcggggttgacaccaacggaa
tttcttttccacgccatttccggaagagaaggtctcgtcgatacagcagttaagactgcg
gaaactggttacatgtcccgtaggttgatgaaatctcttgaagacctatcaacgcggtac
gatgataccgtaaggaattcgtcttcaaatattgtgcagttccagtatggtgacgataaa
ttggaccctgtcgatatggagggccgagctaaaccagtccactttgatcgcacgtttacc
catgctgaggtgacaacctttgataactccgacaaaggccttcttccggatgagataata
actttgtgtcaaaacttactcgctcctgagcgggccaagcttgcaagatttgacctgtca
ggcaagaagttagagtataatgacagaagtgatcacggcatagatcagctggaaagcgcc
agagattttctccagtccattgaggattatcggggaaagggcgtaattcataccgcaaaa
gtgtcaaccagagctctcacttcattcatcaccgcctgcttaaccaagtataagagagct
caagttgaaccaggtcatgcagtgggtgcagtcggtgcacagtccattggagaaccgggg
acgcagatgacattgaaaactttccatttcgctggcgttgctggtatgagtataactcaa
ggtgtaccgcgtatcaaagagattatcaatgcttccaaggaaatcagtacaccagttatc
acctgtgagcttgtcaataagcaagaccttcgcgcagcgcagattgtaaagggccgagtg
gaaaagacctttgtccgagatatcatttattatatcgaggaagattggaccggaaatgaa
gcgtacatcaatattaaaatcgacttttccaccattcaaaacctacaactcgaactaacc
ctccaagatatccttatggccattaaaaaacacaagcgattcaaatctgcagatctaaaa
tttcgttccttcggctcacacattcacattttcgtcgatcaacaaactgcccgaaccgct
ctctccaaagctgaagaagctgctaccggtgctgacccgtatatccgccttaaacatctc
aaacggctcattcccaacattcaggttatcggccattcccaatgtgcgcgagccatcata
cgcacagacgaaacaaacacaaccaacaccctgcttgtggaaggttacggtctgcgtgac
tgcatgaccaccgacggtatcaacggtcgccacacacgcacaaacaacatcatggaaaca
cgtgccgtgctcggcatcgaagccgcgagaacgaccatcgtcgacgagattggcgaggtt
atgaaagacatggccattgacccaagacacatgcagttgcttgcggacgtcatgacatac
aagggtgaggttttggggataacccggtttggcctcgccaagatgcgcgattccgtgcta
caactcgctagttttgagaagacagcggaccatctgttcgatgcgggcggggccgggagg
actgatcttatcgagggagtgtcggagtgtattattgtggggaagagtgtgtccctgggc
acaggggcgatggaagtagtacgcgccctcaacttttatgagggccagattggacggagg
aagacggcttttgaagacgcgtgggaggagatttgtgaggctcggggctgtagtaccggg
gtagaaggcaaaggggtagtcccgagggtcatgaagaaacgaaggaaggaagccgtatga
DBGET
integrated database retrieval system