Acinonyx jubatus (cheetah): 106978131
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Entry
106978131 CDS
T04657
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106978131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aju03021
]
106978131
Enzymes [BR:
aju01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106978131
Transcription machinery [BR:
aju03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106978131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
106978131
NCBI-ProteinID:
XP_014931252
UniProt:
A0A6I9ZYC2
LinkDB
All DBs
Position
A3:complement(98687232..98762083)
Genome browser
AA seq
1718 aa
AA seq
DB search
MLGSKTMPWRRLQGISFGMYSADELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFNSCPGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VCQLRVLEVGALQAVYELERILNRFLEENADPTAFEIQEELERYTTHIVQNNLLGSHGAH
VKNVCESRSKLIASFWKAHMSAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRKADQKDT
EPLGIEDAQMGKRGYLTPTSAREHLIALWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCEVAAPAK
DEEKDSSIALDRSFLSTLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPSVHPGASMVINEDGSRTALSAVDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTTRGCFFTREQYMELLYRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLSLSGKAKISGKAWVQES
PRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRHRVIEESTHCGPRAVRAALNLPEAASCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYNNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWQSRHP
NTMLRNGAFLNYSQKIQAAVKALNLEGGNQNGRSPGTHQILRMWGELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKVDDYSLEWASQAEKSYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLEKIDVQESFCIGEKRDKFQVYQLRFQ
FLPRAHYQQEKCLRPEDILHFMETRFFKILMESIRKKNNKASAFRSVNTRRATQRDLDNT
GDSERNRGEQEGDEEEEGHIVDAEAEEGDADASDTKRKKKQEEEVDYESEEDEVGEENDD
EDVQEEGHGPGEGAEKAQEQDGEVGSGAEEDSAPAAPLTQPRKSTRVREPQGAEAVERRA
QAVRESHPFIEDYHYDTEENLWCQVTVKLPLMKINFDMSSLVVSLAQGTVVYTTKGITRC
LLNETTNKKNEKELVLNTEGINLPELFKYAEVLDLSRLYSNDIHAMANTYGIEAALRVIE
KEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLK
QATMMGSHDELRSPSACIVVGKVVRGGTGLFELKQPLR
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcgaagaccatgccctggcggaggctgcagggcatttccttcgggatgtat
tcggccgacgagctcaagaaattaagcgttaagtccattacgaaccctcgttacctggac
agcctgggaaacccatcagtgaacggcctgtacgatttagctttgggccctgcggattcc
aaagaggtgtgctccacctgtgtgcaggacttcaacagctgccctggccacctgggccac
attgagcttccgcttacagtgtataaccctctcctctttgataaactctacctgctgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtgattcacctctta
gtctgccagctgcgagttctggaagtcggggccctacaagcagtctacgagcttgagaga
attctgaacaggtttctagaagaaaacgctgatcctactgccttcgaaattcaggaagag
ttagaacgatatacaacccatattgtacagaacaatctgttgggatcccatggtgcacat
gtgaaaaatgtttgtgagagcaggagcaaactcattgcttccttctggaaggcacacatg
agtgctaagcgatgtccccactgcaagactggacggtcagttgtccgaaaggagcacaac
agcaaactgaccatcacatatccagccatggtgcacaggaaagctgaccagaaggacaca
gagcccctgggaattgaggatgctcagatgggaaaacgagggtacctgacaccgaccagc
gcccgagaacatcttattgccctttggaagaatgaaggattctttctgaattaccttttt
ttgggactggaagatgttggcatggagtccagattcaatcccagtatgttctttttggat
ttcttggtggtgcccccctcaaggtatcgccctgtcaatcggctaggggaccagatgttt
actaatggccagacggtgaacttgcaggctgtcatgaaggacatggtcctgatccgaaaa
cttctggcgttgatggcccaagaacaggaactgccatgtgaggtggcagcacctgccaag
gatgaggaaaaagactcttcgattgccctggaccgatcctttttgagtacacttcctggc
cagtccctcacagacaaactttacaacatttggattcgtcttcagagccacgtcaatatc
gtgtttgatagtgaaatggataaattaatgatggaaaagtaccctggcattagacagatc
ctggagaagaaggatggcttattccgaaagcacatgatgggaaagcgagtggactatgcg
gcccgctctgtcatctgcccagacatgtacattaacaccaacgaaattggaattcctatg
gtgtttgccacaaaactgacctaccctcagccagtcaccccctggaatgttcaggaactg
aggcaagcggtcatcaatggccccagtgtgcacccgggagcctccatggtcatcaacgag
gatggcagtcgtacggccctgagtgctgtggacctgacacagcgggaagccgtggccaaa
cagctcctgacaccagccacgggggcacctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacatcctcctgctgaaccgacagcccaccctgcacagaccctcc
atccaggcacaccacgcccgcatcctgcccgaagagaaagtcctgcggctccattatgcc
aactgcaaggcgtataatgccgactttgatggagacgagatgaatgcccacttcccccag
agtgaactgggccgggctgaggcctacgtcctggcctgtacagatcagcagtaccttgtt
cccaaggatggccagcccttggcggggttgattcaagatcacatggtttcaggtgcaaac
atgaccactcgaggttgctttttcactcgggagcaatatatggagctgctgtaccgagga
ctcacagacaaagtggggcgtgtgaagctctttcctcctgccatcctgaagccctttcca
ctgtggacgggaaagcaggttgtgtcaacgctgctcataaacataatcccagaggaccac
atcccactgagcttatcgggaaaggcaaagatcagcggcaaagcctgggtgcaggagtct
cctcggcctgttcccggctttaaccctgactcaatgtgcgagtcccaggtgatcatcaga
gaaggggagctgctctgtggggtgctggacaaggcacactatgggagctccgcctatggc
ctggtccactgctgctacgagatctatggtggggagaccagcggcaaggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggtttcaccttgggcgtggaa
gacattctggttaagccgaaggcggatgttaagagacacagagtcattgaagagtccacc
cactgcgggccacgggctgtcagggctgcattaaacctgccagaagctgcgtcatgtgac
gaggtccgagggaaatggcaggatgcccatctgggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacaacaatgagattaacaaggcatgc
atgccatttggcctgcacagacagttcccagagaacaacttgcagatgatggtgcaatct
ggagccaaaggttcaactgtaaacaccatgcagatctcatgcctgctgggccagattgaa
ttggaaggtcggagaccccccctgatggcatctggcaagtcactgccctgctttgagcct
tatgaattcacccccagggctggcggcttcgtcactggcagattcctaactggtatcaag
cctcctgagttcttctttcactgcatggcagggcgagagggtctggtggacaccgccgtg
aaaaccagccgctccggctatctccaaaggtgcatcatcaagcacttggaggggctggtc
gtccagtatgatctgacagtccgcgacagtgacggcagcgtggtacagttcctgtatggg
gaggacggcctggacatccccaagacacagttcctgcagcccaagcagttccccttcctc
gccagcaactatgaggtgataatgaaatcgaagcatctccatgaagttttatccagagca
gatccccaaaaagctctccgccacttcagagccatcaaaaaatggcaaagcaggcatccc
aacaccatgttgagaaatggtgccttcttgaattattcacagaagattcaggcagccgtg
aaagccttgaaccttgagggtgggaaccagaatggccgcagccctgggactcaccagata
ttgagaatgtggggtgagttagatgagcagagtcgaaggaaataccagaagaaggcggct
ccttgtccagaccccagtctgtccgtctggcgcccagacatctactttgcatcagtgtcg
gaaacatttgaaaaaaaggtggatgactatagtctcgagtgggcatctcaagcagagaag
agttatgagaaatcagagctttctcttgacaggctgaggaccctgctgcagctcaagtgg
cagcgctcactatgtgatccgggtgaggccgtgggcctactggctgcccagagcattggg
gagccctccacacagatgaccctgaacactttccactttgctggcagaggcgagatgaat
gtcactctgggcattccgaggttgagggagattctcatggtggccagtgccaacatcaag
acgcccatgatgagcgtgcccgtgttcaacaccaagaaagcactgaagagagtaaaaagc
ctgaagaagcagctcaccagagtgtgcttaggggaggtgttggagaaaattgatgtccag
gaatccttctgtatcggagaaaaacgggacaagtttcaggtgtatcagttgcggtttcag
ttcctgccacgtgcacattaccagcaggagaagtgcctgagacctgaggacatcctgcac
ttcatggaaacgagattctttaaaattctgatggaatccatcagaaagaagaacaataaa
gcctcagctttcagaagcgtaaacactcggagagctacccagcgggatctagacaacact
ggggactcagagaggaaccggggagaacaggagggtgatgaggaagaggaggggcacatt
gtggatgctgaagccgaggagggagacgctgatgcctctgataccaagcgcaagaagaaa
caagaggaggaggtcgattatgagagcgaggaggacgaggttggggaggagaacgacgac
gaggacgtgcaggaggaagggcatggccccggggaaggtgccgagaaggcccaggagcag
gatggagaggtgggctcaggcgccgaggaggactcggcccctgccgcccccctcacacag
ccccggaaatccacccgcgtcagggagccccagggagccgaggccgtggagcgccgtgca
caggccgtgcgcgagtcccacccgttcatagaggactaccattacgacaccgaggagaac
ttgtggtgccaggtgacagtgaagctccctctgatgaagatcaactttgacatgagctcc
ctggtagtgtccttggcccagggcaccgtcgtctacacgacaaagggcatcacgaggtgc
ctcctgaatgaaaccaccaataagaagaatgagaaggagcttgtcttaaacacagaagga
atcaacttgccagagctgttcaagtatgccgaggttctggacttaagccgcctctattcc
aacgacatccacgccatggctaacacgtatggcatcgaggccgcgctgcgggtgattgag
aaggaaatcaaggacgtgtttgctgtgtatggcattgaggttgatccccgccatctctcc
ctggttgccgactatatgtgcttcgagggtgtgtacaagccattgaatcgctttgggatc
cggtcaaactcctcccctctgcagcaaatgacatttgaaaccagcttccagtttctgaag
caggccaccatgatgggatcgcatgatgagctgaggtccccttcagcctgcatcgtggtt
gggaaagttgtcagaggcgggacaggcctattcgagctcaagcagcccctgagatag
DBGET
integrated database retrieval system
