Acanthopagrus latus (yellowfin seabream): 119009951
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Entry
119009951 CDS
T08233
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03020
RNA polymerase
alat04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119009951 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
119009951 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119009951 (polr3a)
Enzymes [BR:
alat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119009951 (polr3a)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
119009951 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
119009951
NCBI-ProteinID:
XP_036937600
EnsemblRapid:
ENSALTG00010018888
LinkDB
All DBs
Position
20:15392223..15411651
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLSYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLTKE
EKLQFMDQLKRPNLAYLQKRGLKKKISDKCRKRTICLNCAAFNGPVKKCGLLKIIHEKYK
TNKKVVDPFVSEFMQSFDIAIEHNKVMEPLLTRAQENLNPLVVLNMFKRIPQEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANF
IQNRHTQMKRFLKYGNREKIAQELRFGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFERSKACQIVASILVGKDEKVRVSLPRPAIMKPMALWTGKQI
FSMILKPSKECPVKANLRTKGKQYSGKGEDLCSNDSFVVIHNSELMCGSMDKGTLGSGSK
KNIFYILLRDWGQLEAANAMSRLARLAPVFLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YQKCDEYIEALQTGKLQQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPADMEGKDEPLEFQRVLDNIRAVYTRPDEPALSQNELVLTADAIMKRADFLC
CRDSFLEEIRKFIKSMSERIKKTRDKYGINDNGTSEPKVLYQLDRVTPTQLEKFLATCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKEELPKVV
VQGIPEVARAVIHIDEQSGKNKYKLLVEGDNLRAVMATHGVNGSRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDPSPVKRPLLFD
NADFHIPLIT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacagatgtggccaaaaagataagccacatctgcttt
gggatgaaatctgctgagcagatgcgacagcaggcccacatccaggtggtcagcaagaac
ctgtacagtcaagacaccaaacacactcctctgtcctatggagtgttggaccaccgtatg
ggcacaagtgagaaggacagaccctgtttgacatgtgggaagaatctagctgattgcctg
ggacattatggctacttggatctggagctgccgtgttttcacgtcggatatttcaaagcc
atcatagggattctacagatgatttgcaagacgtgctcaagcatcatgctgacaaaagag
gagaaactgcagttcatggatcagctgaagaggcccaacctggcctatctccagaaacgt
gggctgaagaagaagatctctgataagtgccgcaaaaggacaatctgtctgaactgtgcc
gcgttcaatgggccagtgaaaaagtgcggcctgctgaagatcatccatgagaagtacaaa
acgaacaagaaggtggtggatccttttgtgtcagaattcatgcagtcttttgatatcgcc
atcgagcacaataaagtgatggagcctctgctgaccagagcacaggaaaacctgaaccct
ttggtcgtgctgaacatgttcaagagaattccccaagaagacattcccctgctgctgatg
aaccctgaggcaggcaaacctgccgacctcatcctcacacgcctcctggtgcctcctctc
tgcatacgcccctctgtggtcagcgacctgaagtcgggcaccaacgaggacgacctcacc
atgaagctcacagagataatcttcctcaacgatgtcatcaaaaagcatcgaatgactggg
gcgaagacccagatgatcatggaggattgggactttctccagctgcagtgtgccctttac
atcaacagtgagctttctggcatccccctcaacatggcacctaagaaatggacaagagga
tttgtgcagagactcaaggggaagcaaggtcgtttcagaggaaacctctcaggaaaaaga
gtggacttttctggcagaactgtcatttctcccgacccaaacctgaggatcgatgaggtg
gctgtccccgtgcatgtagccaaaatcctgacgtacccagagagggtgaacaaagccaat
ctggagctaatgaggaaactcgtccgcaacggtcctgaagttcaccccggcgccaacttt
atccagaaccgtcacacacagatgaaaaggtttttaaagtatggaaaccgcgagaagatc
gcacaggagctgaggtttggtgatgtggtggaaagacacctgatagacggagacattgtc
cttttcaatcgacaaccgtctctgcacaagctcagcatcatggcccacatcgccagagtc
aaacctcacagaacctttcggttcaatgagtgcgtgtgcacgccgtacaatgccgacttt
gatggtgatgaaatgaaccttcatcttcctcaaacagaagaagccaaagccgaagccctt
gtcctgatgggtacaaaagctaatcttgtcactccaagaaatggcgaacctctgattgct
gctattcaggattttctaacaggagcctacctgttgacgctgaaggacaccttcttcgag
agatcaaaagcctgccagatagtggcatccattcttgtgggcaaagatgaaaaagtcagg
gtctctctcccccgcccggctataatgaagcccatggctctgtggacaggcaaacagatc
ttcagcatgattctgaagccgagtaaggaatgtccggtcaaggcgaacctgaggaccaag
ggcaaacagtactctggcaagggagaggatctctgctccaacgattcgtttgtggtgatc
cacaacagcgagctgatgtgtggtagcatggacaagggcaccttgggatctggttccaag
aagaacatcttctacatcctactgagagactggggacagctggaggctgctaatgccatg
tcccgcctggcaagactcgctcctgtttttctctccaaccgcggcttttctatcggcatc
ggtgatgtgacacctggccagggtctgctaaaggccaaacaggacctgctggatgatggt
taccagaagtgtgacgaatacatcgaagcccttcagacgggaaagttgcagcagcagccg
ggctgcacggcggaggagaccctggaggctctcatcttgagggagctgtccgtcatcaga
gaccgagccggcagtgcctgtctcagggagcttgacaagagtaacagccccctgatcatg
gctctttgcggctccaagggttcctttattaatatctctcagatgattgcctgtgtcggc
cagcaggccataagtggctcaagagtgcccgacggctttgagaatcgatccctgcctcat
tttgaaaagcactcaaaactgcctgccgcaaaaggttttgtagccgacagcttctattct
ggcctgacgcccacagagttcttcttccacaccatggccggtcgtgagggtctggtggac
acagctgtgaaaactgcagagacgggatacatgcagcggcgtctggtgaagtccctggag
gacttgtgctcgcagtacgacctgacagtacgcagctccaccggcgacatcatccagttt
atttatggcggcgatggactggaccccgctgacatggagggaaaggatgagccgctggag
tttcagagagtcctggacaacatccgggcggtctacactcgtccagatgagcctgcgctc
agtcagaacgagctggtcctcactgcagatgctatcatgaagagagctgacttcctgtgc
tgcagggacagcttcctggaggaaataaggaaatttattaagagcatgtcagaaaggatc
aagaagaccagagacaagtatggcatcaacgacaatggcaccagcgagccaaaggttctt
tatcaactggaccgcgtaactcccacacagctagagaagttccttgcaacctgcagggat
aagtacatgagagctcagatggagccgggctcggcggtcggggccctttgtgctcagagc
atcggcgagcccggaactcagatgaccctgaaaacgttccactttgctggcgtcgcatcc
atgaacatcactctaggtgtccctcgcatcaaggagatcatcaatgcctctaagaacatc
agcacccccatcatcactgcacacttggacgtggaggacgacgctgactttgccaggctg
gtgaagggaaggatcgagaaaacacttctgggagagatttctgagtacatcgaagaggtt
tttctaccagatgactgcttcattctggtgaaactgtccctggaaaggataagactgctg
cggctcgaggttaatgcagaaacggtgcgttactcgatctgcatgtctaaactacgagtg
aagccaggagacatagccgtgcacggcgaggcggtcgtgtgcgtgtctccaagagagaac
agcaagagctccatgtattacgtgctgcagtctttgaaagaggagcttccaaaggtggtg
gttcaaggtattccagaggtcgcccgagccgtcattcacatcgacgaacagagcggcaag
aacaagtacaaactcctggtggagggcgacaacctgagagctgtcatggcgacgcacgga
gtgaatggaagcaggaccacttcaaataatacgtatgaggttgagaagactctgggtatt
gaggctgctagatccaccatcatcaacgagattcagtacaccatggtgaaccacggaatg
agcatcgaccggcgtcacgtcatgcttctggcagatctcatgtcctacaagggggagatt
ctgggaatcaccaggttcggtttggccaaaatgaaggagagcgtcctcatgctggcctcc
ttcgagaaaacagctgatcatctcttcgacgctgcctacttcggacagaaggattccgtc
tgtggtgtgtctgagtgtatcattatggggatcccgatgaatatcggaacaggactgttt
aaactcctccacaaggcagacaaggatccctctccagtcaaaaggcctctcctcttcgac
aatgcagacttccatataccgctgatcacatag
DBGET
integrated database retrieval system
