Acanthopagrus latus (yellowfin seabream): 119010326
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Entry
119010326 CDS
T08233
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04020
Calcium signaling pathway
alat04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119010326
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119010326
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119010326
Ion channels [BR:
alat04040
]
Ligand-gated channels
Glutamate (ionotropic)
119010326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
MatE
Motif
Other DBs
NCBI-GeneID:
119010326
NCBI-ProteinID:
XP_036938277
EnsemblRapid:
ENSALTG00010001999
LinkDB
All DBs
Position
20:complement(22346239..22394613)
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AA seq
1394 aa
AA seq
DB search
MAIPRGHPPPSPWPPLFLLLLFLLLLISSPLPLQARPLLLHPSINVAVVFSGSSYQTEVR
GRLSGENFVDLPVVVSPVTVLVNDTNPRDLLTHLCDTMATEKLHGVVFEDDVGSGTGAQV
AEVAQILDFLSTQTSLPIVGISGGSAVVIPYKAEGSSFLQMGASLEQQVVSMFKLMEEYD
WGEFAVITSLLPGYDTFVDIVESYTDTSYFLWKLQDVLSLEMSVGANDAKTKRMLQQMDS
RVVLAYCSYEEAQYLFRQAAELGLLGPGYIWMIPSLAVGNPDSPPPDSFPIGVIGVITEQ
WRKSLRQRVREGVAIVAKGAESFKKLYGFIPEGHGDCTKPSKHSDNHTLFRHMLNVTWER
RDLSFNNQGFLSNPSMVIVALDRERLWDKVGTYARGILQVRYPVWPRYGSFLEQVSDDRH
LTVATLEEHPFVMVENVDPGTGTCVRNTVPCRRQSNRTESIIGHSESYTKLCCKGFCIDI
LKKLSRTIKFSYDLYLVTNGKHGKMVHGTWNGMIGEVVYRRADMAIGSLTINEERSEIID
FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYLSPVG
YNRSLISAKSPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLA
SYTANLAAFMIQEQYIDTVSGLSDKKFQKPHEHYPPFRFGTVPNGSTERNIRSNYLDMHT
HMIKYNQKGVEEALESLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGI
ALQKDSRWKRPIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYM
LLVAMGLSLLVFAWEHLLYWKLRHSLHKSCKLDFMLAISRGIYSCFKGVEEPGRSSGLAK
PDLTSNYAQANMLKMLRTAKDLVSTANVETSLDNATKTIEQLSRHGGSLPIRVPQVATEA
VPGGFAYITENHCSIPQRSITPPLLPAAVTSLKQQRGVTRPTPLRYTLPTHSSSCLYDRP
LPVSSLSTPHLAVGEPLPHQHPHHYQTTGRLYVDGHLHSPFIPYTDLQLPDIYASHPVSS
PQAGLSRRKRRSKSFQCDDRDMERIKHRDQEKSDKSPVSLSELKANHLQENHISAPSVDN
IYPGEGMCPRVENYGSWPPEDLMLRGRRRNRRPSFLKATWGSEQMRQLDESQSSLSSQSP
STVPDLFPCIITPTTPAKPYNPAHLRNNLCLPRNQAYLHIREDQRRPNGRKGQRLRYSNS
THLPTYGEAVRHGTGLGRGMVRRATSLLSRQYAQYLNSYPGLPLYHGPLDLQHHSQASSS
HPSPSPVCQLLACGGGRCGSQRALLYQDSVYGAYGVYQGSQTGSEVLAGQGGQPSGSPCV
LRPWRRVSSLESEV
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggccattcccaggggacaccctcctccctccccctggcctcctctcttcctcctcctc
ctcttcctcctcctcctcatctcctccccgctccccctgcaggcccggccgctcctcctc
cacccgtccatcaacgtggcggtggtgttcagcggctccagctaccaaactgaggtcaga
ggtcgcctcagcggggagaactttgtggacctgcccgtggtggtcagcccggtgaccgtg
ctggtcaacgacaccaacccccgcgacctcctgacgcacctctgtgataccatggcaaca
gagaaactgcacggcgttgtgtttgaggacgatgtgggctcgggtaccggggctcaggtg
gcagaagtggctcagatcctggacttcctctccactcagacgtctctgcccatcgtgggc
atcagcggcggctctgcagttgtcatcccgtacaaggcggagggatcctccttcttgcag
atgggagcgtctctggagcagcaggttgtcagcatgttcaagctcatggaggagtacgac
tggggcgagttcgccgtgatcaccagcttgctgccaggctacgacacctttgtggatata
gttgagtcctacacagatacctcctacttcctctggaaacttcaggatgtcttgtctctg
gaaatgtctgttggggctaatgacgcgaagaccaagcgcatgctgcagcagatggactcg
cgggtcgtgctggcgtactgctcctatgaggaggcgcagtacttgtttcgccaggcagct
gagctgggtctgctggggccgggatacatctggatgatccccagtctggccgtgggcaac
cccgacagccctccacccgacagcttccccatcggcgtgatcggagtgattacggagcag
tggaggaagagcttgcggcagagggtgagggagggcgtcgccattgtggcgaaaggcgcc
gagagcttcaagaaactgtacggtttcatccccgagggacacggcgactgcaccaaaccc
tccaaacactccgacaaccacactttgttcaggcacatgctgaacgtgacgtgggagagg
agagatctgtcgttcaacaaccaaggcttcctctccaacccttccatggtcatcgtcgct
ctggaccgggagaggctctgggacaaggtgggaacgtacgctcgagggatccttcaggtc
cgctacccggtctggcctcggtacggcagcttcctggagcaagtgtccgatgaccgtcac
ctgaccgtggccacgctggaggagcatcccttcgtcatggtggagaacgtggacccggga
accggaacctgcgtccgcaacacggtgccctgcaggcgccagtccaaccgcacagagagt
atcatcggccactctgagtcgtacaccaagctgtgctgtaagggtttctgcatagacatc
ctgaagaagctgtcgcgcaccatcaagttctcctacgacctctacctggtcaccaacgga
aaacacggcaagatggtccacggtacttggaacggcatgatcggggaggttgtgtaccga
cgagctgacatggccatcggctcgctcacgatcaacgaggagcgttcggagatcatcgac
ttctccgtgccgttcgtcgagacgggcatcagcgtgatggtcgcccgtagcaacgggaca
gtttcgccctccgcctttctcgagccctacagcccagcggtttgggtcatgatgtttgtg
atgtgcctgaccgtggtggcgatcacagtctttgtgttcgagtacttgagtccagtcggc
tacaaccgcagcctgatcagcgccaagtctcccggtggtccgacgttcaccatcgggaag
tcggtgtggttgttgtggggcatcgtcttcaacaactccgtccccattgaaaacccaaaa
gggacgaccagtaagatcatggttctggtctgggccttcttcgctgtcatcttcctggcc
tcctacactgccaacctggctgccttcatgatccaggagcaatacatcgacacggtgtct
ggactctcggacaaaaagttccagaaacctcacgagcattaccctcctttccgcttcggg
accgtcccaaacggcagcacggagaggaacatccgcagcaactacctcgacatgcacacg
cacatgataaagtacaaccagaagggagtggaagaagctctggagagcctcaaaaccggg
aagctggacgctttcatctacgacgccgccgttttgaactacatggccgggaaggacgaa
ggctgcaagctggtgaccatcggcagcgggaaagtgttcgccaccacggggtacggcatc
gctctgcagaaggactcccgctggaaacggcccattgacctggcgctgctgcagttcctg
ggagacggagacacccagcgcctggagacggtgtggctgtcgggaatctgccagaacgag
aagaacgaggtgatgagcagcaagctggacatcgacaacatggcgggcgtcttctacatg
ctgctggtggcgatgggcctcagcctgctggtgttcgcctgggaacacctgctttactgg
aaactacgacactccctccacaagtcgtgcaaacttgacttcatgttggccatcagcagg
ggtatttacagttgtttcaagggagtcgaggaacccgggcgctcgtctggtttggccaaa
ccggacctgacctccaactacgctcaagcaaacatgctaaagatgcttcgcactgccaag
gacctggtctccactgccaatgtggagacctctctggacaacgccaccaagaccatcgag
cagttgagccgtcatggcggcagcttgcctattcgtgtcccacaagtggccacggaagcc
gtgccgggaggatttgcttacatcacggagaatcactgctcgatccctcagcgctccatc
actccacctctgttacctgcggctgttacctctctgaagcagcagcggggtgtgaccagg
cccacgccgctacgctacacgcttccgacgcactcttcttcgtgtctgtatgatcggcca
cttcctgtgtccagcctcagcacccctcacttagctgtgggcgagccactccctcatcag
cacccgcatcactaccagaccaccgggagactctacgttgacggccatcttcactcgcca
ttcattccctacacggatctccagctacccgacatctacgcgtctcacccggtgtcctcg
cctcaggcagggttatcccgacggaaacggaggtccaagagtttccagtgtgacgacaga
gatatggagaggatcaaacacagggaccaggagaagagcgacaaaagtcccgtctcgctg
agtgagctcaaagccaatcacctccaggagaaccacatctccgcccccagcgttgacaac
atctacccaggggaggggatgtgtcctcgggtggagaactacggctcctggcctccggag
gacctcatgctcagaggcagacgcaggaaccgccgcccctcgttcctcaaagcgacgtgg
ggcagcgagcagatgcgccagctggacgaatcccagtcatcgctgtccagtcagtcaccg
tccaccgtgccagatctgttcccatgcatcatcacgccgaccacacccgcgaagccctac
aaccctgcacaccttcgaaacaacctgtgcctcccacggaaccaggcctacctccacata
cgggaggaccagaggaggcccaatgggcgcaagggccagaggctgcgctactccaactcc
acccacctccccacttacggagaagcagtccgacacgggaccgggttagggcgtgggatg
gtacgcagagccaccagtttgctcagcagacagtacgcccagtacctgaactcatacccc
ggactacccctctaccacgggcccctggacctgcagcaccacagccaggcctccagcagc
cacccgagccccagcccagtgtgtcagctgctggcctgcggtggtgggagatgtggaagc
cagcgggctctgctgtaccaggacagcgtgtacggggcttatggggtctatcagggatcc
cagactggatcggaggtcctggcgggtcagggaggacaaccttcaggaagcccctgcgtg
ctccgtccctggcgacgggtttccagtctggagtctgaggtttga
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